RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 C16orf46Q6P387 395 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 GUSBP11Q6P575 273 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 WDR74Q6RFH5 385 aaPredicted RBP11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 AGTRAPQ6RW13 159 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 SPRED1Q7Z699 444 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 ADGRF3Q8IZF5 1079 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 CARFQ8N187 725 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 LINC01555Q8NAE3 123 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 CCDC74AQ96AQ1 378 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 SLC22A18Q96BI1 424 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 FAM111AQ96PZ2 611 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 SRMSQ9H3Y6 488 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 UTP6Q9NYH9 597 aaKnown RBP11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 CD274Q9NZQ7 290 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 KLK4Q9Y5K2 254 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 SEC16AO15027 2179 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 AHCTF1Q8WYP5 2266 aa11.25□□□□□ -0.61
CHMP2A-207ENST00000600804 A0A1W2PPV9 198 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 PMS2P1A4D2B8 440 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 A8MT66 165 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 NTN3O00634 580 aaPredicted RBP11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 BIRC5O15392 142 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 TAPBPO15533 448 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 B4GAT1O43505 415 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 DUX1O43812 170 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 DLX3O60479 287 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 GUCA1CO95843 209 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 MYL2P10916 166 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 GFAPP14136 432 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 CPA3P15088 417 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 LY6DQ14210 128 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 CAPN13Q6MZZ7 669 aaPredicted RBP11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 MBOAT1Q6ZNC8 495 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 EFL1Q7Z2Z2 1120 aaKnown RBP11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 OOSP2Q86WS3 158 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 FBXO39Q8N4B4 442 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 ARMC2Q8NEN0 867 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 OR4E2Q8NGC2 313 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 OR10G6Q8NH81 332 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 IFI44Q8TCB0 444 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 TTC9Q92623 222 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 L3HYPDHQ96EM0 354 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 CD180Q99467 661 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 MIPEPQ99797 713 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 EGFL8Q99944 293 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 TBC1D10AQ9BXI6 508 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 CD244Q9BZW8 370 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 ASCL3Q9NQ33 180 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 OXSMQ9NWU1 459 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 KCNK4Q9NYG8 393 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 OGFRQ9NZT2 677 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 SEMA5BQ9P283 1151 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 CPSF2Q9P2I0 782 aaKnown RBP11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 PDP2Q9P2J9 529 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 SLC17A7Q9P2U7 560 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 SSUH2Q9Y2M2 353 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 DOPEY2Q9Y3R5 2298 aa11.24□□□□□ -0.61
CHMP2A-207ENST00000600804 PIPSLA2A3N6 862 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 CPED1A4D0V7 1026 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 C2orf74A8MZ97 194 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 J3QKU1 62 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 ERVH48-1M5A8F1 160 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 BTN3A3O00478 584 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 STK16O75716 305 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 C9P02748 559 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 BPGMP07738 259 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 RPS17P08708 135 aaKnown RBP11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 CHRM5P08912 532 aaPredicted RBP11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 IMPDH1P20839 514 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 HRH2P25021 359 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 CD1CP29017 333 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 OAS2P29728 719 aaKnown RBP11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 SERPINB4P48594 390 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 PIK3CGP48736 1102 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 TBPL1P62380 186 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 HERVK_113P63132 956 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 PPP2R2AP63151 447 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 ABATP80404 500 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 E2F1Q01094 437 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 ASPHQ12797 758 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 PRKAA1Q13131 559 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 NAE1Q13564 534 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 E2F2Q14209 437 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 NAA25Q14CX7 972 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 PFKFB4Q16877 469 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 SLC5A12Q1EHB4 618 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 PTCHD3Q3KNS1 767 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 PERM1Q5SV97 790 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 ARHGAP40Q5TG30 622 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 LIPMQ5VYY2 423 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 LCTLQ6UWM7 567 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 LRRC70Q7Z2Q7 622 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 PLXDC1Q8IUK5 500 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 SYTL1Q8IYJ3 562 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 PTGR2Q8N8N7 351 aaPredicted RBP11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 LMNTD1Q8N9Z9 388 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 ZNF248Q8NDW4 579 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 OR6Y1Q8NGX8 325 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 FLVCR1-AS1Q8TAF5 88 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 IL17FQ96PD4 163 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms