RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 LCN10Q6JVE6 187 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 RHBDD2Q6NTF9 364 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 NKAPQ8N5F7 415 aaKnown RBP16.05■□□□□ 0.16
SSBP4-204ENST00000597724 LSM14AQ8ND56 463 aaKnown RBP16.05■□□□□ 0.16
SSBP4-204ENST00000597724 FBF1Q8TES7 1133 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 WBP1Q96G27 269 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 ZNF285Q96NJ3 590 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 RUFY1Q96T51 708 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 RBBP8Q99708 897 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 FAM117AQ9C073 453 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 SLC7A5P2Q9GIP4 190 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 CHST8Q9H2A9 424 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 POPDC3Q9HBV1 291 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 SLC6A20Q9NP91 592 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 MRPS30Q9NP92 439 aaKnown RBP16.05■□□□□ 0.16
SSBP4-204ENST00000597724 ENAMQ9NRM1 1142 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 TAC3Q9UHF0 121 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 ANKRD12Q6UB98 2062 aa16.05■□□□□ 0.16
SSBP4-204ENST00000597724 IGKV1-8A0A0C4DH67 115 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 ATXN7O15265 892 aaPredicted RBP16.04■□□□□ 0.16
SSBP4-204ENST00000597724 NRP2O60462 931 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 SRPX2O60687 465 aaPredicted RBP16.04■□□□□ 0.16
SSBP4-204ENST00000597724 KATNA1O75449 491 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 RECKO95980 971 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 CAPN1P07384 714 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 HIST1H2AGP0C0S8 130 aaPredicted RBP16.04■□□□□ 0.16
SSBP4-204ENST00000597724 HIST1H2ADP20671 130 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 STX2P32856 288 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 ABATP80404 500 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 MC1RQ01726 317 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 POU4F1Q01851 419 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 TCTE1Q5JU00 501 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 ZNF385CQ66K41 422 aaPredicted RBP16.04■□□□□ 0.16
SSBP4-204ENST00000597724 FBXO42Q6P3S6 717 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 AGTRAPQ6RW13 159 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 MBOAT1Q6ZNC8 495 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 CTAGE3PQ8IX95 158 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 ZNF655Q8N720 491 aaPredicted RBP16.04■□□□□ 0.16
SSBP4-204ENST00000597724 IFT81Q8WYA0 676 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 ANKRD7Q92527 254 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 HIST1H2AHQ96KK5 128 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 HIST1H2AJQ99878 128 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 DPH2Q9BQC3 489 aaPredicted RBP16.04■□□□□ 0.16
SSBP4-204ENST00000597724 PLCD4Q9BRC7 762 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 H2AFJQ9BTM1 129 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 GPR87Q9BY21 358 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 ANKMY1Q9P2S6 941 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 MTRF1LQ9UGC7 380 aaKnown RBP16.04■□□□□ 0.16
SSBP4-204ENST00000597724 IKZF3Q9UKT9 509 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 HEATR5BQ9P2D3 2071 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 ATRXP46100 2492 aa16.04■□□□□ 0.16
SSBP4-204ENST00000597724 CREG1O75629 220 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 CCNDBP1O95273 360 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 ENO2P09104 434 aaPredicted RBP16.03■□□□□ 0.16
SSBP4-204ENST00000597724 PRKAR1AP10644 381 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 PTPN4P29074 926 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 SPRP35270 261 aaPredicted RBP16.03■□□□□ 0.16
SSBP4-204ENST00000597724 GCGRP47871 477 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 SLC12A2P55011 1212 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 AP1S2P56377 157 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 RPS15P62841 145 aaKnown RBP16.03■□□□□ 0.16
SSBP4-204ENST00000597724 CDC20Q12834 499 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 TBR1Q16650 682 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 PPP1R3AQ16821 1122 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 PTCHD3Q3KNS1 767 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 GRTP1Q5TC63 336 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 THEMIS2Q5TEJ8 643 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 FRMPD2BQ6IN97 320 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 ZNF425Q6IV72 752 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 CEP128Q6ZU80 1094 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 RNF44Q7L0R7 432 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 PAQR7Q86WK9 346 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 RELL1Q8IUW5 271 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 PPM1NQ8N819 430 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 ANKRD49Q8WVL7 239 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 EXTL1Q92935 676 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 TSPAN17Q96FV3 270 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 GPR22Q99680 433 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 ZFYVE21Q9BQ24 234 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 SELENOSQ9BQE4 189 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 NDC1Q9BTX1 674 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 NLNQ9BYT8 704 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 TRIM54Q9BYV2 358 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 TSPYL1Q9H0U9 437 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 ACTL8Q9H568 366 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 CAB39LQ9H9S4 337 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 GPAMQ9HCL2 828 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 CCDC177Q9NQR7 707 aaPredicted RBP16.03■□□□□ 0.16
SSBP4-204ENST00000597724 ABCF3Q9NUQ8 709 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 IRAK4Q9NWZ3 460 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 DHCR7Q9UBM7 475 aaKnown RBP16.03■□□□□ 0.16
SSBP4-204ENST00000597724 SNX7Q9UNH6 387 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 NOVA2Q9UNW9 492 aaKnown RBP16.03■□□□□ 0.16
SSBP4-204ENST00000597724 SRPK3Q9UPE1 567 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 FARSAQ9Y285 508 aaKnown RBP16.03■□□□□ 0.16
SSBP4-204ENST00000597724 BOD1L1Q8NFC6 3051 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 CFAP46Q8IYW2 2715 aa16.03■□□□□ 0.16
SSBP4-204ENST00000597724 A0A0J9YVX5 310 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 TK2O00142 265 aa16.02■□□□□ 0.16
SSBP4-204ENST00000597724 FAM155BO75949 473 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms