RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 OR4N4Q8N0Y3 316 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 TMEM102Q8N9M5 508 aaPredicted RBP12.49□□□□□ -0.41
LIG1-212ENST00000596549 FBXO15Q8NCQ5 510 aaPredicted RBP12.49□□□□□ -0.41
LIG1-212ENST00000596549 C2CD4AQ8NCU7 369 aaPredicted RBP12.49□□□□□ -0.41
LIG1-212ENST00000596549 ZNF480Q8WV37 535 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 DLG3Q92796 817 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 ZUFSPQ96AP4 578 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 MIB2Q96AX9 1013 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 FKBP10Q96AY3 582 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 CAPZA3Q96KX2 299 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 C10orf90Q96M02 699 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 PWWP2AQ96N64 755 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 NDNQ99608 321 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 TRIM51Q9BSJ1 452 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 FAM167BQ9BTA0 163 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 FAM114A2Q9NRY5 505 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 IARS2Q9NSE4 1012 aaKnown RBP12.49□□□□□ -0.41
LIG1-212ENST00000596549 CTSFQ9UBX1 484 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 TAC3Q9UHF0 121 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 GPN3Q9UHW5 284 aaPredicted RBP12.49□□□□□ -0.41
LIG1-212ENST00000596549 DHRS7Q9Y394 339 aa12.49□□□□□ -0.41
LIG1-212ENST00000596549 TP73O15350 636 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 SORBS2O94875 1100 aaKnown RBP12.48□□□□□ -0.41
LIG1-212ENST00000596549 ERVK-10P10266 1014 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 ALAS2P22557 587 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 GABRB3P28472 473 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 IMPA1P29218 277 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 PNLIPRP1P54315 467 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 ARSFP54793 590 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 MLLT10P55197 1068 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 RAPSNQ13702 412 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 SSPNQ14714 243 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 GRM7Q14831 915 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 ARHGAP19Q14CB8 494 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 TCTE1Q5JU00 501 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 WASHC2DQ5SRD0 308 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 ZNF425Q6IV72 752 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 PAQR7Q86WK9 346 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 CNTN4Q8IWV2 1026 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 TTC29Q8NA56 475 aaPredicted RBP12.48□□□□□ -0.41
LIG1-212ENST00000596549 TEX19Q8NA77 164 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 CALML6Q8TD86 181 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 ASB11Q8WXH4 323 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 SMPDL3AQ92484 453 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 CERS2Q96G23 380 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 EBNA1BP2Q99848 306 aaKnown RBP12.48□□□□□ -0.41
LIG1-212ENST00000596549 ZFYVE21Q9BQ24 234 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 DPH7Q9BTV6 452 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 CCDC68Q9H2F9 335 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 KLHL42Q9P2K6 505 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 PLAAQ9Y263 795 aa12.48□□□□□ -0.41
LIG1-212ENST00000596549 E7ENX8 843 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 GFYI3L273 518 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 ALOX12BO75342 701 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 ENO3P13929 434 aaPredicted RBP12.47□□□□□ -0.41
LIG1-212ENST00000596549 CMPK1P30085 196 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 SKIV2L2P42285 1042 aaKnown RBP12.47□□□□□ -0.41
LIG1-212ENST00000596549 OR1D4P47884 311 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 RRADP55042 308 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 SNRPNP63162 240 aaKnown RBP12.47□□□□□ -0.41
LIG1-212ENST00000596549 TAP2Q03519 686 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 NKG7Q16617 165 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 PRTGQ2VWP7 1150 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 SPANXN3Q5MJ09 141 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 DCAF10Q5QP82 559 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 YOD1Q5VVQ6 348 aaPredicted RBP12.47□□□□□ -0.41
LIG1-212ENST00000596549 ICE2Q659A1 982 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 OVCH1Q7RTY7 1134 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 KLHL7Q8IXQ5 586 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 ARHGEF39Q8N4T4 335 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 Q8NA96 180 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 SMAD5Q99717 465 aaKnown RBP12.47□□□□□ -0.41
LIG1-212ENST00000596549 PLCD4Q9BRC7 762 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 MESP1Q9BRJ9 268 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 SLC26A1Q9H2B4 701 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 MRPS30Q9NP92 439 aaKnown RBP12.47□□□□□ -0.41
LIG1-212ENST00000596549 CUEDC1Q9NWM3 386 aaPredicted RBP12.47□□□□□ -0.41
LIG1-212ENST00000596549 P4HTMQ9NXG6 502 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 GPR83Q9NYM4 423 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 STOX2Q9P2F5 926 aaPredicted RBP12.47□□□□□ -0.41
LIG1-212ENST00000596549 ANKMY1Q9P2S6 941 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 ADAMTS6Q9UKP5 1117 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 CHMP2BQ9UQN3 213 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 COMMD10Q9Y6G5 202 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 MAU2Q9Y6X3 613 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 NAV2Q8IVL1 2488 aa12.47□□□□□ -0.41
LIG1-212ENST00000596549 HYKKA2RU49 373 aa12.46□□□□□ -0.41
LIG1-212ENST00000596549 A6NL46 340 aa12.46□□□□□ -0.41
LIG1-212ENST00000596549 SMAPO00193 183 aa12.46□□□□□ -0.41
LIG1-212ENST00000596549 EIF3FO00303 357 aaPredicted RBP12.46□□□□□ -0.41
LIG1-212ENST00000596549 P2RX6O15547 441 aa12.46□□□□□ -0.41
LIG1-212ENST00000596549 TTI1O43156 1089 aa12.46□□□□□ -0.41
LIG1-212ENST00000596549 SRPX2O60687 465 aaPredicted RBP12.46□□□□□ -0.41
LIG1-212ENST00000596549 VPS26AO75436 327 aa12.46□□□□□ -0.41
LIG1-212ENST00000596549 SYF2O95926 243 aaKnown RBP12.46□□□□□ -0.41
LIG1-212ENST00000596549 ALBP02768 609 aa12.46□□□□□ -0.41
LIG1-212ENST00000596549 RPA3P35244 121 aaPredicted RBP12.46□□□□□ -0.41
LIG1-212ENST00000596549 CD97P48960 835 aa12.46□□□□□ -0.41
LIG1-212ENST00000596549 PGGT1BP53609 377 aa12.46□□□□□ -0.41
LIG1-212ENST00000596549 CDKN2DP55273 166 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms