RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 A0A0J9YVX5 310 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 IDSB3KWA1 339 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 WISP2O76076 250 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 UNC5CO95185 931 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 BMP10O95393 424 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 C1orf105O95561 183 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 APOA4P06727 396 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 CELA2AP08217 269 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 HTR1EP28566 365 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 GRIA1P42261 906 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 EMP2P54851 167 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 SRSF11Q05519 484 aaKnown RBP9.49□□□□□ -0.89
LIG1-209ENST00000596104 CDH17Q12864 832 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 KLF1Q13351 362 aaPredicted RBP9.49□□□□□ -0.89
LIG1-209ENST00000596104 DSG2Q14126 1118 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 MUM1Q2TAK8 710 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 CNSTQ6PJW8 725 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 TMEM207Q6UWW9 146 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 RPTNQ6XPR3 784 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 RIPOR1Q6ZS17 1223 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 LINC00523Q86TU6 105 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 LDB1Q86U70 411 aaPredicted RBP9.49□□□□□ -0.89
LIG1-209ENST00000596104 CCDC170Q8IYT3 715 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 TAB3Q8N5C8 712 aaPredicted RBP9.49□□□□□ -0.89
LIG1-209ENST00000596104 AMER2Q8N7J2 671 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 LRRC57Q8N9N7 239 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 OR4L1Q8NH43 312 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 RAD51AP1Q96B01 352 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 TTC1Q99614 292 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 TMEM121Q9BTD3 319 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 TSSK1BQ9BXA7 367 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 TRIM8Q9BZR9 551 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 RNF32Q9H0A6 362 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 SYNPO2LQ9H987 977 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 CHST11Q9NPF2 352 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 IGSF5Q9NSI5 407 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 MARCH4Q9P2E8 410 aaPredicted RBP9.49□□□□□ -0.89
LIG1-209ENST00000596104 SUCOQ9UBS9 1254 aaKnown RBP9.49□□□□□ -0.89
LIG1-209ENST00000596104 NFS1Q9Y697 457 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 DUSP10Q9Y6W6 482 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 NUP210LQ5VU65 1888 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 ERI2A8K979 691 aaKnown RBP9.48□□□□□ -0.89
LIG1-209ENST00000596104 CCL21O00585 134 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 PRMT5O14744 637 aaPredicted RBP9.48□□□□□ -0.89
LIG1-209ENST00000596104 FFAR3O14843 346 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 GPR42O15529 346 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 SNRNP200O75643 2136 aaKnown RBP9.48□□□□□ -0.89
LIG1-209ENST00000596104 SUN1O94901 812 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 RASAL1O95294 804 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 WDPCPO95876 746 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 F10P00742 488 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 EIF2S1P05198 315 aaKnown RBP9.48□□□□□ -0.89
LIG1-209ENST00000596104 FBLP22087 321 aaKnown RBP9.48□□□□□ -0.89
LIG1-209ENST00000596104 ADRA1DP25100 572 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 CETN2P41208 172 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 BDKRB1P46663 353 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 EFNA3P52797 238 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 EMP3P54852 163 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 EEF1A2Q05639 463 aaKnown RBP9.48□□□□□ -0.89
LIG1-209ENST00000596104 PCOLCEQ15113 449 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 TMED2Q15363 201 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 SPA17Q15506 151 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.48□□□□□ -0.897e-16■□□□□ 8.4
LIG1-209ENST00000596104 FBXO42Q6P3S6 717 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 MTFR2Q6P444 385 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 TTC23LQ6PF05 361 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 ZGRF1Q86YA3 2104 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 ZNF295-AS1Q8N0V1 137 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 ARHGEF39Q8N4T4 335 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 AMER3Q8N944 861 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 DNAAF3Q8N9W5 541 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 OR6P1Q8NGX9 317 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 DNAJB8Q8NHS0 232 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 MVB12AQ96EY5 273 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 CALR3Q96L12 384 aaKnown RBP9.48□□□□□ -0.89
LIG1-209ENST00000596104 ZFYVE21Q9BQ24 234 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 P2RY12Q9H244 342 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 C14orf105Q9NVL8 296 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 RIC8BQ9NVN3 520 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 TRPC4Q9UBN4 977 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 SEC14L3Q9UDX4 400 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 TTC7AQ9ULT0 858 aaPredicted RBP9.48□□□□□ -0.89
LIG1-209ENST00000596104 RUVBL2Q9Y230 463 aaKnown RBP9.48□□□□□ -0.89
LIG1-209ENST00000596104 REXO2Q9Y3B8 237 aaKnown RBP9.48□□□□□ -0.89
LIG1-209ENST00000596104 TCAF1Q9Y4C2 921 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 CCDC168Q8NDH2 2452 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 ADGRG4Q8IZF6 3080 aa9.48□□□□□ -0.89
LIG1-209ENST00000596104 HIVEP1P15822 2718 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 TCRBV7S2A1N4TA0A589 114 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 GRID2IPA4D2P6 1211 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 OR5H15A6NDH6 313 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 GOLGA6L9A6NEM1 432 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 BTNL10A8MVZ5 291 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 H0YGG7 62 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 PRAMEF2O60811 474 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 KRT38O76015 456 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 WFS1O76024 890 aa9.47□□□□□ -0.89
LIG1-209ENST00000596104 CRYABP02511 175 aaKnown RBP9.47□□□□□ -0.89
LIG1-209ENST00000596104 SNRPB2P08579 225 aaKnown RBP9.47□□□□□ -0.89
LIG1-209ENST00000596104 ITGAMP11215 1152 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms