RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 LOC101059948A0A1B0GTJ6 334 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 CDC7O00311 574 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 PHGDHO43175 533 aaKnown RBP14.43□□□□□ -0.1
UPF1-202ENST00000594243 EFSO43281 561 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 ZNF749O43361 778 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 WISP3O95389 354 aaPredicted RBP14.43□□□□□ -0.1
UPF1-202ENST00000594243 GUCA1CO95843 209 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 ANXA5P08758 320 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 CCDC166P0CW27 439 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 HRH2P25021 359 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 STAT5AP42229 794 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 ATP6V0D1P61421 351 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 ZKSCAN8Q15776 578 aaPredicted RBP14.43□□□□□ -0.1
UPF1-202ENST00000594243 UAP1Q16222 522 aaPredicted RBP14.43□□□□□ -0.1
UPF1-202ENST00000594243 DEFB110Q30KQ9 67 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 TCTE1Q5JU00 501 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 SBSNQ6UWP8 590 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 TRMT10CQ7L0Y3 403 aaKnown RBP14.43□□□□□ -0.1
UPF1-202ENST00000594243 GPR155Q7Z3F1 870 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 CCDC91Q7Z6B0 441 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 ADAMTSL2Q86TH1 951 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 VASH2Q86V25 355 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 LRRN4CLQ8ND94 238 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 SNRNP27Q8WVK2 155 aaKnown RBP14.43□□□□□ -0.1
UPF1-202ENST00000594243 MED8Q96G25 268 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 SPRTNQ9H040 489 aaPredicted RBP14.43□□□□□ -0.1
UPF1-202ENST00000594243 ATG10Q9H0Y0 220 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 ACTR5Q9H9F9 607 aaPredicted RBP14.43□□□□□ -0.1
UPF1-202ENST00000594243 GPN2Q9H9Y4 310 aaPredicted RBP14.43□□□□□ -0.1
UPF1-202ENST00000594243 ABCF3Q9NUQ8 709 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 SNX7Q9UNH6 387 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 OARD1Q9Y530 152 aa14.43□□□□□ -0.1
UPF1-202ENST00000594243 APC2O95996 2303 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 ACACAQ13085 2346 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 OR2A25A4D2G3 310 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 HCRTR1O43613 425 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 INHBAP08476 426 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 LIFP15018 202 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 TCN2P20062 427 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 DLSTP36957 453 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 SLC26A3P40879 764 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 HNMTP50135 292 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 PMS2P54278 862 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 TBPL1P62380 186 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 CDKL1Q00532 357 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 RELAQ04206 551 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 NAE1Q13564 534 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 PPP1R3AQ16821 1122 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 ARHGAP40Q5TG30 622 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 PRAMEF13Q5VWM6 474 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 CAPN13Q6MZZ7 669 aaPredicted RBP14.42□□□□□ -0.1
UPF1-202ENST00000594243 FRA10AC1Q70Z53 315 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 TBC1D1Q86TI0 1168 aaPredicted RBP14.42□□□□□ -0.1
UPF1-202ENST00000594243 SLC38A9Q8NBW4 561 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.42□□□□□ -0.1
UPF1-202ENST00000594243 FBXL8Q96CD0 374 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 RNF31Q96EP0 1072 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 UBXN10Q96LJ8 280 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 DPH2Q9BQC3 489 aaPredicted RBP14.42□□□□□ -0.1
UPF1-202ENST00000594243 PLCD4Q9BRC7 762 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 TMEM184CQ9NVA4 438 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 KCND3Q9UK17 655 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 IKZF3Q9UKT9 509 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 SRPK3Q9UPE1 567 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 LHX6Q9UPM6 363 aa14.42□□□□□ -0.1
UPF1-202ENST00000594243 NPEPPSL1A6NEC2 478 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 H3BMH7 237 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 MEN1O00255 615 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 ZSCAN9O15535 394 aaPredicted RBP14.41□□□□□ -0.1
UPF1-202ENST00000594243 CD1DP15813 335 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 AGXTP21549 392 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 MSH2P43246 934 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 SERPINB9P50453 376 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 ARSFP54793 590 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 YBX1P67809 324 aaKnown RBP14.41□□□□□ -0.1
UPF1-202ENST00000594243 SRSF6Q13247 344 aaKnown RBP14.41□□□□□ -0.1
UPF1-202ENST00000594243 TSNQ15631 228 aaKnown RBP14.41□□□□□ -0.1
UPF1-202ENST00000594243 MROH9Q5TGP6 573 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 PRAMEF17Q5VTA0 474 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 FBXO42Q6P3S6 717 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 LCTLQ6UWM7 567 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 MBOAT1Q6ZNC8 495 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 RNF44Q7L0R7 432 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 TAOK1Q7L7X3 1001 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 DSELQ8IZU8 1212 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 ZNF655Q8N720 491 aaPredicted RBP14.41□□□□□ -0.1
UPF1-202ENST00000594243 OR56A3Q8NH54 315 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 SLC44A1Q8WWI5 657 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 MR1Q95460 341 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 ALKBH8Q96BT7 664 aaKnown RBP14.41□□□□□ -0.1
UPF1-202ENST00000594243 CRELD1Q96HD1 420 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 SLC45A3Q96JT2 553 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 EGFL8Q99944 293 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 ZFYVE21Q9BQ24 234 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 SELENOSQ9BQE4 189 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 HAUS8Q9BT25 410 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 NDC1Q9BTX1 674 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 SGPP1Q9BX95 441 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 FAM117AQ9C073 453 aa14.41□□□□□ -0.1
UPF1-202ENST00000594243 SLC6A20Q9NP91 592 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms