RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 DCAF4L2Q8NA75 395 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 HJURPQ8NCD3 748 aaPredicted RBP16.04■□□□□ 0.16
LIG1-206ENST00000594067 SKA2Q8WVK7 121 aaPredicted RBP16.04■□□□□ 0.16
LIG1-206ENST00000594067 REXO5Q96IC2 774 aaKnown RBP16.04■□□□□ 0.16
LIG1-206ENST00000594067 ZNF300Q96RE9 604 aaPredicted RBP16.04■□□□□ 0.16
LIG1-206ENST00000594067 STARD7Q9NQZ5 370 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 WNT9AO14904 365 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 SDC1P18827 310 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 ZXDBP98169 803 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 ABHD18Q0P651 414 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 IL18R1Q13478 541 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 KCNJ8Q15842 424 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 LYPLAL1Q5VWZ2 237 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 KIAA1841Q6NSI8 718 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 RNF175Q8N4F7 328 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 BEND7Q8N7W2 519 aaPredicted RBP16.04■□□□□ 0.16
LIG1-206ENST00000594067 APOLD1Q96LR9 279 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 VN1R3Q9BXE9 311 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 DUSP21Q9H596 190 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 KCTD5Q9NXV2 234 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 SCHIP1Q9P0W5 487 aaPredicted RBP16.04■□□□□ 0.16
LIG1-206ENST00000594067 TSC22D4Q9Y3Q8 395 aa16.04■□□□□ 0.16
LIG1-206ENST00000594067 A0A1W2PQ45 241 aaPredicted RBP16.03■□□□□ 0.16
LIG1-206ENST00000594067 A0A1W2PQY0 241 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 RFXANKO14593 260 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 OXSR1O95747 527 aaPredicted RBP16.03■□□□□ 0.16
LIG1-206ENST00000594067 HOXB9P17482 250 aaPredicted RBP16.03■□□□□ 0.16
LIG1-206ENST00000594067 CCR7P32248 378 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 NPTX1Q15818 432 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 RFX4Q33E94 735 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 LAIR1Q6GTX8 287 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 SHQ1Q6PI26 577 aaKnown RBP16.03■□□□□ 0.16
LIG1-206ENST00000594067 TPGS1Q6ZTW0 290 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 UBE2R2Q712K3 238 aaPredicted RBP16.03■□□□□ 0.16
LIG1-206ENST00000594067 MYOCQ99972 504 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 CLSTN3Q9BQT9 956 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 TMEM175Q9BSA9 504 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 ANKMY1Q9P2S6 941 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 STOML2Q9UJZ1 356 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 YIPF1Q9Y548 306 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 NPIPB15A6NHN6 443 aaPredicted RBP16.03■□□□□ 0.16
LIG1-206ENST00000594067 UPK3BL1B0FP48 263 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 UPK3BL2E5RIL1 263 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 hCG_2039718K7EN88 272 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 BNIP3LO60238 219 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 MYO1DO94832 1006 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 PARNO95453 639 aaKnown RBP16.03■□□□□ 0.16
LIG1-206ENST00000594067 CLK3P49761 638 aaKnown RBP16.03■□□□□ 0.16
LIG1-206ENST00000594067 DAPP51397 102 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 SLC35A2P78381 396 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 SYT6Q5T7P8 510 aaPredicted RBP16.03■□□□□ 0.16
LIG1-206ENST00000594067 RETSATQ6NUM9 610 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 RFLNAQ6ZTI6 216 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 B3GNT8Q7Z7M8 397 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 ADCK1Q86TW2 530 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 SLC22A16Q86VW1 577 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 P2RY8Q86VZ1 359 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 DNAJB8Q8NHS0 232 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 PHF10Q8WUB8 498 aaKnown RBP16.03■□□□□ 0.16
LIG1-206ENST00000594067 STARD8Q92502 1023 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 KLHL25Q9H0H3 589 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 POLE4Q9NR33 117 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 CLEC4EQ9ULY5 219 aa16.03■□□□□ 0.16
LIG1-206ENST00000594067 TTC34A8MYJ7 566 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 ITGAMP11215 1152 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 PRPS2P11908 318 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 IL1RNP18510 177 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 SERPINB10P48595 397 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 MASP1P48740 699 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 NCS1P62166 190 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 HSPA14Q0VDF9 509 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 SELENBP1Q13228 472 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 GPR33Q49SQ1 333 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 CATSPEREQ5SY80 951 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 ZCCHC8Q6NZY4 707 aaKnown RBP16.02■□□□□ 0.16
LIG1-206ENST00000594067 ARL14EPQ8N8R7 260 aaPredicted RBP16.02■□□□□ 0.16
LIG1-206ENST00000594067 ADAMTS19Q8TE59 1207 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 RHNO1Q9BSD3 238 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 C2orf49Q9BVC5 232 aaPredicted RBP16.02■□□□□ 0.16
LIG1-206ENST00000594067 EBPLQ9BY08 206 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 HECAQ9UBI9 543 aaPredicted RBP16.02■□□□□ 0.16
LIG1-206ENST00000594067 MBD1Q9UIS9 605 aaPredicted RBP16.02■□□□□ 0.16
LIG1-206ENST00000594067 THSD7BQ9C0I4 1608 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.02■□□□□ 0.16
LIG1-206ENST00000594067 JUNDP17535 347 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 NSG1P42857 185 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 MAGEA2P43356 314 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 B4GALNT1Q00973 533 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 CLCA4Q14CN2 919 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 DEPDC1Q5TB30 811 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 METTL2BQ6P1Q9 378 aaKnown RBP16.02■□□□□ 0.16
LIG1-206ENST00000594067 CCDC81Q6ZN84 652 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 MRPL9Q9BYD2 267 aaKnown RBP16.02■□□□□ 0.16
LIG1-206ENST00000594067 NMRK2Q9NPI5 230 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 THG1LQ9NWX6 298 aaKnown RBP16.02■□□□□ 0.16
LIG1-206ENST00000594067 SNX6Q9UNH7 406 aa16.02■□□□□ 0.16
LIG1-206ENST00000594067 SAMD4AQ9UPU9 718 aaKnown RBP16.02■□□□□ 0.16
LIG1-206ENST00000594067 KCNE1BA0A087WTH5 132 aa16.02■□□□□ 0.15
LIG1-206ENST00000594067 CCNDBP1O95273 360 aa16.02■□□□□ 0.15
LIG1-206ENST00000594067 FPGSQ05932 587 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms