RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 NSL1Q96IY1 281 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 SLC46A1Q96NT5 459 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 TRIM55Q9BYV6 548 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 NPHS2Q9NP85 383 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 DKK4Q9UBT3 224 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 PISDQ9UG56 409 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 CIDEBQ9UHD4 219 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 SLC39A10Q9ULF5 831 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 TLCD2A6NGC4 264 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 C2orf74A8MZ97 194 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 GSC2O15499 205 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 ENTPD5O75356 428 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 FAM155BO75949 473 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 DXOO77932 396 aaKnown RBP18.96■□□□□ 0.63
LSM4-203ENST00000593829 CATP04040 527 aaKnown RBP18.96■□□□□ 0.63
LSM4-203ENST00000593829 DHRS4L1P0CG22 281 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 MLLT3P42568 568 aaPredicted RBP18.96■□□□□ 0.63
LSM4-203ENST00000593829 GRTP1Q5TC63 336 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 ASB11Q8WXH4 323 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 RBBP8Q99708 897 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 RAB11FIP5Q9BXF6 653 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 VCXQ9H320 206 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 ZNF768Q9H5H4 540 aaKnown RBP18.96■□□□□ 0.63
LSM4-203ENST00000593829 POMT2Q9UKY4 750 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 TNFSF15O95150 251 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 PKLRP30613 574 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 KPNA2P52292 529 aaKnown RBP18.96■□□□□ 0.63
LSM4-203ENST00000593829 IL2P60568 153 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 PIWIL4Q7Z3Z4 852 aaKnown RBP18.96■□□□□ 0.63
LSM4-203ENST00000593829 RAB42Q8N4Z0 105 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 CYTH2Q99418 400 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 MAP3K3Q99759 626 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 MENTQ9BUN1 341 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 MANSC1Q9H8J5 431 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 SEMA5BQ9P283 1151 aa18.96■□□□□ 0.63
LSM4-203ENST00000593829 PIPSLA2A3N6 862 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 TMEM8BA6NDV4 472 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 EFCAB7A8K855 629 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 ARHGEF33A8MVX0 844 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 ITGA2BP08514 1039 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 CHRM5P08912 532 aaPredicted RBP18.95■□□□□ 0.62
LSM4-203ENST00000593829 CCL4P13236 92 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 ITIH1P19827 911 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 SPRP35270 261 aaPredicted RBP18.95■□□□□ 0.62
LSM4-203ENST00000593829 SEPHS1P49903 392 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 POU4F1Q01851 419 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 EFTUD2Q15029 972 aaKnown RBP eCLIP18.95■□□□□ 0.622e-11■■■■■ 29.6
LSM4-203ENST00000593829 MUM1Q2TAK8 710 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 CCSMST1Q4G0I0 132 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 FAM129CQ86XR2 697 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 CARFQ8N187 725 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 MYO1HQ8N1T3 1032 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 ZFAND2BQ8WV99 257 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 KLHL6Q8WZ60 621 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 LINGO1Q96FE5 620 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 YIPF3Q9GZM5 350 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 NMRK1Q9NWW6 199 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 ACTR10Q9NZ32 417 aa18.95■□□□□ 0.62
LSM4-203ENST00000593829 KIF26BQ2KJY2 2108 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 IGHV5-51A0A0C4DH38 117 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 GFYI3L273 518 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 CAPNS1P04632 268 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 FGF3P11487 239 aaPredicted RBP18.94■□□□□ 0.62
LSM4-203ENST00000593829 MAP4P27816 1152 aaKnown RBP18.94■□□□□ 0.62
LSM4-203ENST00000593829 PRDX3P30048 256 aaKnown RBP18.94■□□□□ 0.62
LSM4-203ENST00000593829 PGGT1BP53609 377 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 MAPK10P53779 464 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 SLC12A2P55011 1212 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 TAS2R39P59534 338 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 SLC34A1Q06495 639 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 RFWD2Q8NHY2 731 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 DCAKDQ8WVC6 231 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 PAFAH2Q99487 392 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 OCIAD1Q9NX40 245 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 FRYQ5TBA9 3013 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 B4E171 279 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 KLF11O14901 512 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 ZBTB14O43829 449 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 ETV5P41161 510 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 TSPAN7P41732 249 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 ERVPABLB-1P60509 514 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.94■□□□□ 0.62
LSM4-203ENST00000593829 UBE2R2Q712K3 238 aaPredicted RBP18.94■□□□□ 0.62
LSM4-203ENST00000593829 KMT5CQ86Y97 462 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 FBXO15Q8NCQ5 510 aaPredicted RBP18.94■□□□□ 0.62
LSM4-203ENST00000593829 OR9A1PQ8NGU1 263 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 OR2L8Q8NGY9 312 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 TCP10LQ8TDR4 215 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 ZNF578Q96N58 590 aaPredicted RBP18.94■□□□□ 0.62
LSM4-203ENST00000593829 IL17FQ96PD4 163 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 GPR22Q99680 433 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 ASCL3Q9NQ33 180 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 C1GALT1Q9NS00 363 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 THSD1Q9NS62 852 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 SPHK1Q9NYA1 384 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 SPATA7Q9P0W8 599 aa18.94■□□□□ 0.62
LSM4-203ENST00000593829 STX18Q9P2W9 335 aaKnown RBP18.94■□□□□ 0.62
LSM4-203ENST00000593829 TSPAN12O95859 305 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 C8GP07360 202 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 NELFEP18615 380 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms