RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 TRIM31Q9BZY9 425 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 TRIM4Q9C037 500 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 MRPS30Q9NP92 439 aaKnown RBP14.63□□□□□ -0.07
TRIM28-203ENST00000593582 ENAMQ9NRM1 1142 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 CUTCQ9NTM9 273 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 UTP6Q9NYH9 597 aaKnown RBP14.63□□□□□ -0.07
TRIM28-203ENST00000593582 CHMP2BQ9UQN3 213 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 TEX264Q9Y6I9 313 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 TENM4Q6N022 2769 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 SPENQ96T58 3664 aaKnown RBP14.62□□□□□ -0.07
TRIM28-203ENST00000593582 A0A0J9YVX5 310 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 OR2A25A4D2G3 310 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 FITM1A5D6W6 292 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 EFCAB8A8MWE9 144 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 PYCARD-AS1I3L0S3 204 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 NDC80O14777 642 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 DSCR3O14972 297 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 AHSGP02765 367 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 EIF2S1P05198 315 aaKnown RBP14.62□□□□□ -0.07
TRIM28-203ENST00000593582 OTX2P32243 289 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 CASRP41180 1078 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 GCGRP47871 477 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 PGDP52209 483 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 PRDX1Q06830 199 aaKnown RBP14.62□□□□□ -0.07
TRIM28-203ENST00000593582 KLRB1Q12918 225 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 WASHC2DQ5SRD0 308 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 FRMPD2BQ6IN97 320 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 MED25Q71SY5 747 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 RNF44Q7L0R7 432 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 PIWIL4Q7Z3Z4 852 aaKnown RBP14.62□□□□□ -0.07
TRIM28-203ENST00000593582 PALM2Q8IXS6 379 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 TEX19Q8NA77 164 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 OR2Y1Q8NGV0 311 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 ZNF480Q8WV37 535 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 PWWP2AQ96N64 755 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 ZFYVE21Q9BQ24 234 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 SLC25A23Q9BV35 468 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 ANKMY1Q9P2S6 941 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 TAC3Q9UHF0 121 aa14.62□□□□□ -0.07
TRIM28-203ENST00000593582 G3BP2Q9UN86 482 aaKnown RBP14.62□□□□□ -0.07
TRIM28-203ENST00000593582 PCDHGA9Q9Y5G4 932 aaKnown RBP14.62□□□□□ -0.07
TRIM28-203ENST00000593582 SEC16AO15027 2179 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 HYKKA2RU49 373 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 E7ENX8 843 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 K7EM74 188 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 PEX12O00623 359 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 FANCGO15287 622 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 NRP2O60462 931 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 SNRNP200O75643 2136 aaKnown RBP14.61□□□□□ -0.07
TRIM28-203ENST00000593582 WISP1O95388 367 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 NR1D1P20393 614 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 GABRB3P28472 473 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 YBX1P67809 324 aaKnown RBP14.61□□□□□ -0.07
TRIM28-203ENST00000593582 TAP2Q03519 686 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 KCNC4Q03721 635 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 TLE1Q04724 770 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 ATP1A4Q13733 1029 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 TEDDM1Q5T9Z0 273 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 THEMIS2Q5TEJ8 643 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 ICE2Q659A1 982 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 STEAP4Q687X5 459 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 MRPL14Q6P1L8 145 aaKnown RBP14.61□□□□□ -0.07
TRIM28-203ENST00000593582 SPNS2Q8IVW8 549 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 MYO1HQ8N1T3 1032 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 PPFIBP2Q8ND30 876 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 MCOLN3Q8TDD5 553 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 EEF1AKMT1Q8WVE0 214 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 FKBP10Q96AY3 582 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 PTERQ96BW5 349 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 PLCD4Q9BRC7 762 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 PLAC1Q9HBJ0 212 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 SLC6A20Q9NP91 592 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 ABCF3Q9NUQ8 709 aa14.61□□□□□ -0.07
TRIM28-203ENST00000593582 CORO1CQ9ULV4 474 aaPredicted RBP14.61□□□□□ -0.07
TRIM28-203ENST00000593582 LOC105369274A0A096LPK9 316 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 LOC102723532A0A0G2JNH3 316 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 IGHEP01854 428 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 ALBP02768 609 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 C8GP07360 202 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 ITGAXP20702 1163 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 CSRP3P50461 194 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 CDKN2DP55273 166 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 ABATP80404 500 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 TIAL1Q01085 375 aaKnown RBP eCLIP14.6□□□□□ -0.07
TRIM28-203ENST00000593582 SP140Q13342 867 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 PDAP1Q13442 181 aaKnown RBP14.6□□□□□ -0.07
TRIM28-203ENST00000593582 FRG1Q14331 258 aaKnown RBP14.6□□□□□ -0.07
TRIM28-203ENST00000593582 RBM20Q5T481 1227 aaKnown RBP14.6□□□□□ -0.07
TRIM28-203ENST00000593582 FBXO42Q6P3S6 717 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 TRMT10BQ6PF06 316 aaKnown RBP14.6□□□□□ -0.07
TRIM28-203ENST00000593582 PAQR3Q6TCH7 311 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 OVCH1Q7RTY7 1134 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 MRGPREQ86SM8 312 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 ANKMY2Q8IV38 441 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 OR4N4Q8N0Y3 316 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 GPATCH11Q8N954 259 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 BBOF1Q8ND07 529 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 FER1L6-AS2Q96M78 137 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 CCDC138Q96M89 665 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 WDR83Q9BRX9 315 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms