RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ARHGAP33O14559 1287 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 SCAMP1O15126 338 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 VILLO15195 856 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 KDM1AO60341 852 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 CLDN9O95484 217 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 CHEK2O96017 543 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 CAPN1P07384 714 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 SERPINA6P08185 405 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 MTHFD1P11586 935 aaKnown RBP13.03□□□□□ -0.32
VMP1-217ENST00000593168 F3P13726 295 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 CTSEP14091 401 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 HGFP14210 728 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 CCND1P24385 295 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 NDUFS1P28331 727 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 SERPINB3P29508 390 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 TAP2Q03519 686 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 PRKG2Q13237 762 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 PDCD2Q16342 344 aaPredicted RBP13.03□□□□□ -0.32
VMP1-217ENST00000593168 CYP2A13Q16696 494 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 ZNF423Q2M1K9 1284 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 GGTA1PQ4G0N0 100 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 SOWAHCQ53LP3 525 aaPredicted RBP13.03□□□□□ -0.32
VMP1-217ENST00000593168 SPDYAQ5MJ70 313 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 LETMD1Q6P1Q0 360 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 RNF165Q6ZSG1 346 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 MTDHQ86UE4 582 aaKnown RBP13.03□□□□□ -0.32
VMP1-217ENST00000593168 NRROSQ86YC3 692 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 FITM2Q8N6M3 262 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 GBP7Q8N8V2 638 aaPredicted RBP13.03□□□□□ -0.32
VMP1-217ENST00000593168 SNX31Q8N9S9 440 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 L3MBTL4Q8NA19 623 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 CEP70Q8NHQ1 597 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 METTL6Q8TCB7 284 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 ACTRT2Q8TDY3 377 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 TWIST2Q8WVJ9 160 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 CCT6BQ92526 530 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 KCNA7Q96RP8 456 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 MIPEPQ99797 713 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 MENTQ9BUN1 341 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 RAB11FIP5Q9BXF6 653 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 MIR1-1HGQ9H1L0 117 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 WDR55Q9H6Y2 383 aaPredicted RBP13.03□□□□□ -0.32
VMP1-217ENST00000593168 ACTR8Q9H981 624 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 ABCF3Q9NUQ8 709 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 IMP3Q9NV31 184 aaKnown RBP13.03□□□□□ -0.32
VMP1-217ENST00000593168 DNAAF2Q9NVR5 837 aaKnown RBP13.03□□□□□ -0.32
VMP1-217ENST00000593168 KLF15Q9UIH9 416 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 TDRKHQ9Y2W6 561 aaKnown RBP13.03□□□□□ -0.32
VMP1-217ENST00000593168 TIMM22Q9Y584 194 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 CFAP20Q9Y6A4 193 aaKnown RBP13.03□□□□□ -0.32
VMP1-217ENST00000593168 KCNE2Q9Y6J6 123 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 IGSF10Q6WRI0 2623 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 GCN1Q92616 2671 aaKnown RBP13.03□□□□□ -0.32
VMP1-217ENST00000593168 OR5K4A6NMS3 321 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 HGSO14964 777 aaPredicted RBP13.02□□□□□ -0.33
VMP1-217ENST00000593168 BCAT2O15382 392 aaPredicted RBP13.02□□□□□ -0.33
VMP1-217ENST00000593168 SH3BP5O60239 455 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 VPS4BO75351 444 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 SKAP2O75563 359 aaPredicted RBP13.02□□□□□ -0.33
VMP1-217ENST00000593168 WFS1O76024 890 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 CSF2P04141 144 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 JUNP05412 331 aaKnown RBP13.02□□□□□ -0.33
VMP1-217ENST00000593168 NME1P15531 152 aaKnown RBP13.02□□□□□ -0.33
VMP1-217ENST00000593168 NPPBP16860 134 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 JUNDP17535 347 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 NXPH1P58417 271 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 TBPL1P62380 186 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 E2F2Q14209 437 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 KRT33BQ14525 404 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 LIPJQ5W064 366 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 FAM91A1Q658Y4 838 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 DUS1LQ6P1R4 473 aaKnown RBP13.02□□□□□ -0.33
VMP1-217ENST00000593168 SLC30A9Q6PML9 568 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 YTHDF3Q7Z739 585 aaKnown RBP13.02□□□□□ -0.33
VMP1-217ENST00000593168 CDYL2Q8N8U2 506 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 HMGCLL1Q8TB92 370 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 ZFPM2Q8WW38 1151 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 C19orf60Q96EN9 201 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 MED8Q96G25 268 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 CDK15Q96Q40 435 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 OR4K3Q96R72 315 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 OR52B2Q96RD2 323 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 SLC29A3Q9BZD2 475 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 MYLK2Q9H1R3 596 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 TCEAL2Q9H3H9 227 aaPredicted RBP13.02□□□□□ -0.33
VMP1-217ENST00000593168 KIR3DX1Q9H7L2 352 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 CCDC177Q9NQR7 707 aaPredicted RBP13.02□□□□□ -0.33
VMP1-217ENST00000593168 SCHIP1Q9P0W5 487 aaPredicted RBP13.02□□□□□ -0.33
VMP1-217ENST00000593168 CIDEBQ9UHD4 219 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 TRIM33Q9UPN9 1127 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 RNF11Q9Y3C5 154 aa13.02□□□□□ -0.33
VMP1-217ENST00000593168 GOLGA8QA0A0J9YX86 632 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 GOLGA8OA6NCC3 632 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 OR52A4PA6NMU1 304 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 GOLGA8NF8WBI6 632 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 FCHO1O14526 889 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 CLGNO14967 610 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 PIP5K1BO14986 540 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 EML2O95834 649 aa13.01□□□□□ -0.33
VMP1-217ENST00000593168 FTH1P19P0C7X4 201 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms