RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 RPS14P62263 151 aaKnown RBP9.56□□□□□ -0.88
LIG3-216ENST00000593099 KRR1Q13601 381 aaKnown RBP9.56□□□□□ -0.88
LIG3-216ENST00000593099 VPS26BQ4G0F5 336 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 MANEALQ5VSG8 457 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 METTL21CQ5VZV1 264 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 ADHFE1Q8IWW8 467 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 TBC1D21Q8IYX1 336 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 OR9Q1Q8NGQ5 310 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 DNAJB14Q8TBM8 379 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 NAT6Q93015 286 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 SLC39A3Q9BRY0 314 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 BOCQ9BWV1 1114 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 UGT2B28Q9BY64 529 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 CD244Q9BZW8 370 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 FTSJ1Q9UET6 329 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 KIR2DS5A0A0G2JLQ3 304 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 A0A0G2JNG1 304 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 LOC730098B7Z3J9 87 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 KIR2DS3K7RE56 304 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 PCDH7O60245 1069 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 SERPINB7O75635 380 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 PROS1P07225 676 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 CCNYL3P0C7X3 344 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 OCM2P0CE71 109 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 OCMP0CE72 109 aaPredicted RBP9.56□□□□□ -0.88
LIG3-216ENST00000593099 CDH1P12830 882 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 IVDP26440 423 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 AFF3P51826 1226 aaKnown RBP9.56□□□□□ -0.88
LIG3-216ENST00000593099 ZNF155Q12901 538 aaPredicted RBP9.56□□□□□ -0.88
LIG3-216ENST00000593099 KIR2DS5Q14953 304 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 ALG11Q2TAA5 492 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 NIPAL1Q6NVV3 410 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 CEP19Q96LK0 163 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 CCDC90BQ9GZT6 254 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 MYLK2Q9H1R3 596 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 KCNH6Q9H252 994 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 CHMP1AQ9HD42 196 aaPredicted RBP9.56□□□□□ -0.88
LIG3-216ENST00000593099 DNAAF2Q9NVR5 837 aaKnown RBP9.56□□□□□ -0.88
LIG3-216ENST00000593099 SIPA1L1O43166 1804 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 CHURC1-FNTBB4DL54 471 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 BHMG1C9JSJ3 638 aaPredicted RBP9.56□□□□□ -0.88
LIG3-216ENST00000593099 H7BY64 318 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 LATO43561 262 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 LDB2O43679 373 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 FNTBP49356 437 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 CSNK1EP49674 416 aaKnown RBP9.56□□□□□ -0.88
LIG3-216ENST00000593099 RAB28P51157 221 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 TPMTP51580 245 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 GPNMBQ14956 572 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 LRIT3Q3SXY7 679 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 TOR1AIP1Q5JTV8 583 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 MACC1Q6ZN28 852 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 ADCK1Q86TW2 530 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 RBM12BQ8IXT5 1001 aaKnown RBP9.56□□□□□ -0.88
LIG3-216ENST00000593099 RNF148Q8N7C7 305 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 ZNF781Q8N8C0 355 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 LPGAT1Q92604 370 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 PRAP1Q96NZ9 151 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 EBPLQ9BY08 206 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 EQTNQ9NQ60 294 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 ATXN10Q9UBB4 475 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 PCDHB3Q9Y5E6 796 aa9.56□□□□□ -0.88
LIG3-216ENST00000593099 COL11A1P12107 1806 aaPredicted RBP9.56□□□□□ -0.88
LIG3-216ENST00000593099 A0A0U1RQS6 177 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 FAM220BPB1ANY3 271 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 EBLN1P0CF75 366 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 JUPP14923 745 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 ZNF23P17027 643 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 ATP6V1B2P21281 511 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 RBMS1P29558 406 aaKnown RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 FOXN2P32314 431 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 MAGEA6P43360 314 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 PRR5P85299 388 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 DEFB133Q30KQ1 61 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 C10orf62Q5T681 223 aaPredicted RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 CHMP1BQ7LBR1 199 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 AADATQ8N5Z0 425 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 CEP76Q8TAP6 659 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 SEC14L1Q92503 715 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 CDK15Q96Q40 435 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 SEPHS2Q99611 448 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 IMPAD1Q9NX62 359 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 EURLQ9NYK6 297 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 PHF11Q9UIL8 331 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 TRIP12Q14669 1992 aaPredicted RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 AURKAO14965 403 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 IL9P15248 144 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 CREB1P16220 341 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 JAK1P23458 1154 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 ZNF140P52738 457 aaPredicted RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 PSME3P61289 254 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 BTN3A2P78410 334 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 TFF2Q03403 129 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 TSC22D1Q15714 1073 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 RNF43Q68DV7 783 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 GOLGA7Q7Z5G4 137 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 DHDDSQ86SQ9 333 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 ZBED6CLQ96FA7 236 aaPredicted RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 GFM1Q96RP9 751 aaKnown RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 ZNF607Q96SK3 696 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms