RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ANKRD12Q6UB98 2062 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 PRAMEF33A0A0G2JMD5 474 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 NPEPPSL1A6NEC2 478 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 STX16-NPEPL1H3BU86 382 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 CDC7O00311 574 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 STX16O14662 325 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 KLK8O60259 260 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 RPN2P04844 631 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 GP1BAP07359 652 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 C8GP07360 202 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 TROVE2P10155 538 aaKnown RBP eCLIP11.52□□□□□ -0.57
DDX39A-219ENST00000592927 PNLIPP16233 465 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 IMPDH1P20839 514 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 ALDH4A1P30038 563 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 SLC1A6P48664 564 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 ABCE1P61221 599 aaKnown RBP11.52□□□□□ -0.57
DDX39A-219ENST00000592927 INSM1Q01101 510 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-219ENST00000592927 GALNT1Q10472 559 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-219ENST00000592927 ILKQ13418 452 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-219ENST00000592927 DUS1LQ6P1R4 473 aaKnown RBP11.52□□□□□ -0.57
DDX39A-219ENST00000592927 UNC5DQ6UXZ4 953 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 CYHR1Q6ZMK1 362 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 FRA10AC1Q70Z53 315 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 TBC1D21Q8IYX1 336 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 DCBLD1Q8N8Z6 715 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 Q8N9G6 341 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-219ENST00000592927 PHC3Q8NDX5 983 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 ZFPM2Q8WW38 1151 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 L3HYPDHQ96EM0 354 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 CNDP1Q96KN2 507 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 CCDC3Q9BQI4 270 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 SIKE1Q9BRV8 207 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 TRMOQ9BU70 441 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 GATA5Q9BWX5 397 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-219ENST00000592927 DRC3Q9H069 523 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 FAM107BQ9H098 131 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 TRIT1Q9H3H1 467 aaKnown RBP11.52□□□□□ -0.57
DDX39A-219ENST00000592927 SLCO1B3Q9NPD5 702 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-219ENST00000592927 OARD1Q9Y530 152 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 NOTCH2Q04721 2471 aa11.52□□□□□ -0.57
DDX39A-219ENST00000592927 SUPT3HB4E1H0 165 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 SNX3O60493 162 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 SUPT3HO75486 399 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 HSPA4LO95757 839 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 S100BP04271 92 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-219ENST00000592927 MTHFD2P13995 350 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 GFAPP14136 432 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 GPR3P46089 330 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 KCNC1P48547 511 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 PPM1FP49593 454 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-219ENST00000592927 HK2P52789 917 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 NAGLUP54802 743 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 ALDH18A1P54886 795 aaKnown RBP11.51□□□□□ -0.57
DDX39A-219ENST00000592927 CDKL1Q00532 357 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 E2F1Q01094 437 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 RCN2Q14257 317 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 GPR18Q14330 331 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 PLCL1Q15111 1095 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 TGFBIQ15582 683 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 CFAP157Q5JU67 520 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 PERM1Q5SV97 790 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 HIST2H2BCQ6DN03 193 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 METTL2BQ6P1Q9 378 aaKnown RBP11.51□□□□□ -0.57
DDX39A-219ENST00000592927 TTC23LQ6PF05 361 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 SBSNQ6UWP8 590 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 ZCCHC23Q6ZST2 131 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 TMEM26Q6ZUK4 368 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 ZNF438Q7Z4V0 828 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 ZNF761Q86XN6 746 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-219ENST00000592927 SPNS2Q8IVW8 549 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 FBXO39Q8N4B4 442 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 OR5AR1Q8NGP9 310 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 OR5K2Q8NHB8 316 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 PSMG3-AS1Q96PY0 264 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 HGH1Q9BTY7 390 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 C1QTNF3Q9BXJ4 246 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 TRIM54Q9BYV2 358 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 TRIM55Q9BYV6 548 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 ABCG4Q9H172 646 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 UCK1Q9HA47 277 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 EML4Q9HC35 981 aaKnown RBP11.51□□□□□ -0.57
DDX39A-219ENST00000592927 STARD5Q9NSY2 213 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 KLHL14Q9P2G3 628 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 POLG2Q9UHN1 485 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 MAN2B2Q9Y2E5 1009 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 SSUH2Q9Y2M2 353 aa11.51□□□□□ -0.57
DDX39A-219ENST00000592927 TNPO3Q9Y5L0 923 aaKnown RBP11.51□□□□□ -0.57
DDX39A-219ENST00000592927 SPTAN1Q13813 2472 aaKnown RBP11.51□□□□□ -0.57
DDX39A-219ENST00000592927 PABPN1LA6NDY0 278 aaKnown RBP11.5□□□□□ -0.57
DDX39A-219ENST00000592927 LILRA5A6NI73 299 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 UBXN8O00124 270 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 KDM1AO60341 852 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 MATN4O95460 622 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 C1orf105O95561 183 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 MT-CO3P00414 261 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 CATP04040 527 aaKnown RBP11.5□□□□□ -0.57
DDX39A-219ENST00000592927 CYP2A7P20853 494 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 OR1D5P58170 312 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms