RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 VPS26AO75436 327 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 PSIP1O75475 530 aaKnown RBP18.02■□□□□ 0.48
CCDC43-205ENST00000592333 CCDC175P0C221 793 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 MLNP12872 115 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 PKMP14618 531 aaKnown RBP18.02■□□□□ 0.48
CCDC43-205ENST00000592333 MCM3P25205 808 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 MGAT1P26572 445 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 TSFMP43897 325 aaKnown RBP18.02■□□□□ 0.48
CCDC43-205ENST00000592333 VSX2P58304 361 aaPredicted RBP18.02■□□□□ 0.48
CCDC43-205ENST00000592333 MRPL49Q13405 166 aaKnown RBP18.02■□□□□ 0.48
CCDC43-205ENST00000592333 ELOAQ14241 798 aaKnown RBP18.02■□□□□ 0.48
CCDC43-205ENST00000592333 NR6A1Q15406 480 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 RBBP7Q16576 425 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 DOPEY1Q5JWR5 2465 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 LMNTD2Q8IXW0 634 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 OTUD6BQ8N6M0 293 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 FBXO15Q8NCQ5 510 aaPredicted RBP18.02■□□□□ 0.48
CCDC43-205ENST00000592333 C19orf60Q96EN9 201 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 LMF1Q96S06 567 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 MIPEPQ99797 713 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 SYBUQ9NX95 663 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 CIDEBQ9UHD4 219 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 SLC5A6Q9Y289 635 aa18.02■□□□□ 0.48
CCDC43-205ENST00000592333 HIVEP3Q5T1R4 2406 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 A0A1W2PQ72 361 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 ANKUB1A6NFN9 424 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 MYO1CO00159 1063 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 TXNDC9O14530 226 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 CCNDBP1O95273 360 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 HPP00738 406 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 CATP04040 527 aaKnown RBP18.01■□□□□ 0.47
CCDC43-205ENST00000592333 CHRM3P20309 590 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 FDXRP22570 491 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 FMO4P31512 558 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 BDKRB1P46663 353 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 GARNL3Q5VVW2 1013 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 CNSTQ6PJW8 725 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 CUZD1Q86UP6 607 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 CILP2Q8IUL8 1156 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 ST6GALNAC3Q8NDV1 305 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 OR11G2Q8NGC1 345 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 STT3BQ8TCJ2 826 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 INPP5DQ92835 1189 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 MIEF2Q96C03 454 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 DPH7Q9BTV6 452 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 EPS8L2Q9H6S3 715 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 CTSFQ9UBX1 484 aa18.01■□□□□ 0.47
CCDC43-205ENST00000592333 ZC3H7BQ9UGR2 993 aaKnown RBP18.01■□□□□ 0.47
CCDC43-205ENST00000592333 A0A0J9YVX5 310 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 FAM237BA0A1B0GVD1 139 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 ZGLP1P0C6A0 271 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 ERVK-10P10266 1014 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 OR1D4P47884 311 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 GLRBP48167 497 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 PRDX1Q06830 199 aaKnown RBP18■□□□□ 0.47
CCDC43-205ENST00000592333 KCNJ11Q14654 390 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 TLR1Q15399 786 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 PRTGQ2VWP7 1150 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 TTLL9Q3SXZ7 439 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 CCSMST1Q4G0I0 132 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 ATG9BQ674R7 924 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 FRMPD2BQ6IN97 320 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 NEPROQ6NW34 567 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 RPUSD3Q6P087 351 aaKnown RBP18■□□□□ 0.47
CCDC43-205ENST00000592333 FBXO42Q6P3S6 717 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 PLCD4Q9BRC7 762 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 CRB3Q9BUF7 120 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 ZBTB20Q9HC78 741 aaPredicted RBP18■□□□□ 0.47
CCDC43-205ENST00000592333 MRPS30Q9NP92 439 aaKnown RBP18■□□□□ 0.47
CCDC43-205ENST00000592333 C14orf105Q9NVL8 296 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 COMMD10Q9Y6G5 202 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 TEX15Q9BXT5 2789 aa18■□□□□ 0.47
CCDC43-205ENST00000592333 LOC105369274A0A096LPK9 316 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 LOC102723532A0A0G2JNH3 316 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 E5RI56 91 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 NIPSNAP2O75323 286 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 LDLRP01130 860 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 ACPPP15309 386 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 PSMB5P28074 263 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 RPA3P35244 121 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-205ENST00000592333 KCNJ1P48048 391 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 FOXL2P58012 376 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 AP2B1P63010 937 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 ABATP80404 500 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 KLC1Q07866 573 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 ISLR2Q6UXK2 745 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 OR4N4Q8N0Y3 316 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 MCUQ8NE86 351 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 DNAJB14Q8TBM8 379 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-205ENST00000592333 KCNJ9Q92806 393 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 C5orf34Q96MH7 638 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 TGIF2Q9GZN2 237 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 SOX17Q9H6I2 414 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-205ENST00000592333 XAB2Q9HCS7 855 aaKnown RBP17.99■□□□□ 0.47
CCDC43-205ENST00000592333 LZTFL1Q9NQ48 299 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 SAMD15Q9P1V8 674 aa17.99■□□□□ 0.47
CCDC43-205ENST00000592333 ERRFI1Q9UJM3 462 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-205ENST00000592333 NOVA2Q9UNW9 492 aaKnown RBP17.99■□□□□ 0.47
CCDC43-205ENST00000592333 CRYL1Q9Y2S2 319 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms