RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 OR2A1Q8NGT9 310 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 FBF1Q8TES7 1133 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 ATL1Q8WXF7 558 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 MRRFQ96E11 262 aaKnown RBP9.68□□□□□ -0.86
BRCA1-227ENST00000591849 CATSPER2Q96P56 530 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 OLFM1Q99784 485 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 SELENOSQ9BQE4 189 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 DPH7Q9BTV6 452 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 GPR87Q9BY21 358 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 FAM129AQ9BZQ8 928 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 TWSG1Q9GZX9 223 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 CHRNA10Q9GZZ6 450 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 PCBD2Q9H0N5 130 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 CHST8Q9H2A9 424 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 GPAMQ9HCL2 828 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 CCDC177Q9NQR7 707 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-227ENST00000591849 CTNNAL1Q9UBT7 734 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 ADAMTS6Q9UKP5 1117 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 SRPK3Q9UPE1 567 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 PDE10AQ9Y233 779 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 MTO1Q9Y2Z2 717 aaKnown RBP9.68□□□□□ -0.86
BRCA1-227ENST00000591849 CFAP46Q8IYW2 2715 aa9.68□□□□□ -0.86
BRCA1-227ENST00000591849 A0A1W2PPV9 198 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 CDC14CA4D256 554 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 FAM159BA6NKW6 160 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 CXorf49A8MYA2 514 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 E7ENX8 843 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 ERVH48-1M5A8F1 160 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 PRICKLE3O43900 615 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 SRPX2O60687 465 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 GUCA1CO95843 209 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 PIM1P11309 404 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 STMN1P16949 149 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 WT1P19544 449 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 PGGT1BP53609 377 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 VSX2P58304 361 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 TAS2R39P59534 338 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 GPX6P59796 221 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 TIAL1Q01085 375 aaKnown RBP eCLIP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 TAP2Q03519 686 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 PRDX1Q06830 199 aaKnown RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 GPS2Q13227 327 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 NAB1Q13506 487 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 NAE1Q13564 534 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 GRM7Q14831 915 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 UAP1Q16222 522 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 DEFB109BQ30KR1 87 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 FAM214AQ32MH5 1076 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 PTCHD3Q3KNS1 767 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 ICE2Q659A1 982 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 FCRL6Q6DN72 434 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 CAPN13Q6MZZ7 669 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 AGTRAPQ6RW13 159 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 RAPH1Q70E73 1250 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 FRA10AC1Q70Z53 315 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 IFT20Q8IY31 132 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 SNRNP27Q8WVK2 155 aaKnown RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 SEC14L1Q92503 715 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 EXTL1Q92935 676 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 RERGQ96A58 199 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 LRFN5Q96NI6 719 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 BBC3Q96PG8 261 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 EGFL8Q99944 293 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 C17orf62Q9BQA9 187 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 DPH2Q9BQC3 489 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 ATG10Q9H0Y0 220 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 LRRC4CQ9HCJ2 640 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 PCMTD2Q9NV79 361 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 STOX2Q9P2F5 926 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 IFT80Q9P2H3 777 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 ANKMY1Q9P2S6 941 aa9.67□□□□□ -0.86
BRCA1-227ENST00000591849 MRPS18BQ9Y676 258 aaKnown RBP9.67□□□□□ -0.86
BRCA1-227ENST00000591849 ZNF462Q96JM2 2506 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 NPEPPSL1A6NEC2 478 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 ATXN7O15265 892 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-227ENST00000591849 CREG1O75629 220 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 CD63P08962 238 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 ENO2P09104 434 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-227ENST00000591849 RHOXF2BP0C7M4 288 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 ERGP11308 486 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 CCND1P24385 295 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 HRH2P25021 359 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 PTPN4P29074 926 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 IMPA1P29218 277 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 GRK3P35626 688 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 CCR10P46092 362 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 GABRA4P48169 554 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 AP1S2P56377 157 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 DCDP81605 110 aaKnown RBP9.66□□□□□ -0.86
BRCA1-227ENST00000591849 CDC20Q12834 499 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 ZNF460Q14592 562 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 SLMAPQ14BN4 828 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 TBR1Q16650 682 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 KBTBD12Q3ZCT8 623 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 WASHC2DQ5SRD0 308 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 PRAMEF13Q5VWM6 474 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 BORAQ6PGQ7 559 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 TTLL10Q6ZVT0 673 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 C17orf64Q86WR6 236 aa9.66□□□□□ -0.86
BRCA1-227ENST00000591849 DSELQ8IZU8 1212 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms