RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 NEK11Q8NG66 645 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 CDC26Q8NHZ8 85 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 SLC38A5Q8WUX1 472 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 SLC44A1Q8WWI5 657 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 PEX13Q92968 403 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 CIDECQ96AQ7 238 aaPredicted RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 SGF29Q96ES7 293 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 TSNARE1Q96NA8 513 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 OR2A14Q96R47 310 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 CDRT15Q96T59 188 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 CCDC77Q9BR77 488 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 GPATCH1Q9BRR8 931 aaKnown RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 MIS12Q9H081 205 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 PLK3Q9H4B4 646 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 DENND2DQ9H6A0 471 aaPredicted RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 MAGIXQ9H6Y5 334 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 SLC38A10Q9HBR0 1119 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 EPB41L5Q9HCM4 733 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 DMAP1Q9NPF5 467 aaPredicted RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 ATAD3AQ9NVI7 634 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 NSMCE4AQ9NXX6 385 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 MRPL39Q9NYK5 338 aaKnown RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 EURLQ9NYK6 297 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 UBA2Q9UBT2 640 aaPredicted RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 FBXL17Q9UF56 701 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 GIMAP2Q9UG22 337 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 CD300AQ9UGN4 299 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 ATP6V1HQ9UI12 483 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 VANGL2Q9ULK5 521 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 SMG6Q86US8 1419 aaKnown RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 MRC2Q9UBG0 1479 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 SMCHD1A6NHR9 2005 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 GPR75-ASB3A0A0A6YYF3 556 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 H7C0S8 307 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 NDUFS8O00217 210 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 MAP2K7O14733 419 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 KCNN4O15554 427 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 PLPP2O43688 288 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 HS6ST1O60243 411 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 LDB3O75112 727 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 TRIM16O95361 564 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 HSPA4LO95757 839 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 PLGP00747 810 aaPredicted RBP3.34□□□□□ -1.87
VMP1-212ENST00000591782 ASS1P00966 412 aaKnown RBP3.34□□□□□ -1.87
VMP1-212ENST00000591782 CHRNA1P02708 482 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 HMGN1P05114 100 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 RB1P06400 928 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 SRPRAP08240 638 aaKnown RBP3.34□□□□□ -1.87
VMP1-212ENST00000591782 POLR2MP0CAP2 368 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 CPA3P15088 417 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 GJA1P17302 382 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 GAP43P17677 238 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 M6PRP20645 277 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 UGT1A1P22309 533 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 CFL1P23528 166 aaKnown RBP3.34□□□□□ -1.87
VMP1-212ENST00000591782 GDI1P31150 447 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 NUP62P37198 522 aaPredicted RBP3.34□□□□□ -1.87
VMP1-212ENST00000591782 MSH2P43246 934 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 DRG2P55039 364 aaKnown RBP3.34□□□□□ -1.87
VMP1-212ENST00000591782 TUBB4BP68371 445 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 POU3F1Q03052 451 aaPredicted RBP3.34□□□□□ -1.87
VMP1-212ENST00000591782 SULT2A1Q06520 285 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 KLC1Q07866 573 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 LRMPQ12912 555 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 RALGDSQ12967 914 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 CUL2Q13617 745 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 DOC2AQ14183 400 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 HADHQ16836 314 aaKnown RBP3.34□□□□□ -1.87
VMP1-212ENST00000591782 UGP2Q16851 508 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 KLHL40Q2TBA0 621 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 MYLK3Q32MK0 819 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 PCGF3Q3KNV8 242 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 FUT11Q495W5 492 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 TTMPQ5BVD1 217 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 STXBP5Q5T5C0 1151 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 IRAK1BP1Q5VVH5 260 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 FAM205BPQ63HN1 556 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 KIF6Q6ZMV9 814 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 FAM47EQ6ZV65 393 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 CCDC190Q86UF4 302 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 EXOC3L1Q86VI1 746 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 NR2C2APQ86WQ0 139 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 TMPRSS12Q86WS5 348 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 NKAIN4Q8IVV8 208 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 MAP7D3Q8IWC1 876 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.34□□□□□ -1.87
VMP1-212ENST00000591782 PM20D2Q8IYS1 436 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 ZNF619Q8N2I2 560 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 RASGEF1CQ8N431 466 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 RFLNBQ8N5W9 214 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 OR56B2PQ8NGI1 322 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 THAP6Q8TBB0 222 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 AGR3Q8TD06 166 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 DQX1Q8TE96 717 aaKnown RBP3.34□□□□□ -1.87
VMP1-212ENST00000591782 CD101Q93033 1021 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 C19orf60Q96EN9 201 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 ANKRD36BP1Q96IX9 119 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 C7orf34Q96L11 122 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 GDAP1L1Q96MZ0 367 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 USP28Q96RU2 1077 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms