RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 NFKB2Q00653 900 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 NAE1Q13564 534 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 C1orf189Q5VU69 101 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 FRMPD2BQ6IN97 320 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 FBXO42Q6P3S6 717 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 INO80CQ6PI98 192 aaPredicted RBP11.06□□□□□ -0.64
VMP1-211ENST00000591315 AGTRAPQ6RW13 159 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 GPR155Q7Z3F1 870 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 OR4N4Q8N0Y3 316 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 RAB42Q8N4Z0 105 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 ESX1Q8N693 406 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 MCOLN3Q8TDD5 553 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 CDKL2Q92772 493 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 MR1Q95460 341 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 SLC22A18Q96BI1 424 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 PDLIM5Q96HC4 596 aaKnown RBP11.06□□□□□ -0.64
VMP1-211ENST00000591315 BBC3Q96PG8 261 aaPredicted RBP11.06□□□□□ -0.64
VMP1-211ENST00000591315 FMO2Q99518 471 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 CHRNA10Q9GZZ6 450 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 CHST8Q9H2A9 424 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 ACTR5Q9H9F9 607 aaPredicted RBP11.06□□□□□ -0.64
VMP1-211ENST00000591315 GPN2Q9H9Y4 310 aaPredicted RBP11.06□□□□□ -0.64
VMP1-211ENST00000591315 GPAMQ9HCL2 828 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 LHX9Q9NQ69 397 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 PCMTD2Q9NV79 361 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 NSMCE4AQ9NXX6 385 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 PLCL2Q9UPR0 1127 aa11.06□□□□□ -0.64
VMP1-211ENST00000591315 SMG1Q96Q15 3661 aaKnown RBP11.05□□□□□ -0.64
VMP1-211ENST00000591315 E7EQ34 232 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 SLC16A5O15375 505 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 CPNE3O75131 537 aaKnown RBP11.05□□□□□ -0.64
VMP1-211ENST00000591315 KATNA1O75449 491 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 MSL3P1P0C860 447 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 MYBL2P10244 700 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 PRKAR1AP10644 381 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 CYP2A7P20853 494 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 RORAP35398 523 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 VSX2P58304 361 aaPredicted RBP11.05□□□□□ -0.64
VMP1-211ENST00000591315 RPS18P62269 152 aaKnown RBP11.05□□□□□ -0.64
VMP1-211ENST00000591315 TBPL1P62380 186 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 SNRPNP63162 240 aaKnown RBP11.05□□□□□ -0.64
VMP1-211ENST00000591315 POU4F1Q01851 419 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 ABHD18Q0P651 414 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 DLG1Q12959 904 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 MAP7Q14244 749 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 ARHGAP19Q14CB8 494 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 OR4D1Q15615 310 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 TSNQ15631 228 aaKnown RBP11.05□□□□□ -0.64
VMP1-211ENST00000591315 UAP1Q16222 522 aaPredicted RBP11.05□□□□□ -0.64
VMP1-211ENST00000591315 PPP1R3AQ16821 1122 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 TEX35Q5T0J7 233 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 GRTP1Q5TC63 336 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 ICE2Q659A1 982 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 PCSK4Q6UW60 755 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 BPHLQ86WA6 291 aaPredicted RBP11.05□□□□□ -0.64
VMP1-211ENST00000591315 PAQR7Q86WK9 346 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 RELL1Q8IUW5 271 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 N4BP2L2Q92802 583 aaPredicted RBP11.05□□□□□ -0.64
VMP1-211ENST00000591315 PTERQ96BW5 349 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 PYCR2Q96C36 320 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 CLIP3Q96DZ5 547 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 MED8Q96G25 268 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 CCDC138Q96M89 665 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 FANCEQ9HB96 536 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 MRPS30Q9NP92 439 aaKnown RBP11.05□□□□□ -0.64
VMP1-211ENST00000591315 ARL15Q9NXU5 204 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 TXNDC16Q9P2K2 825 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 DHCR7Q9UBM7 475 aaKnown RBP11.05□□□□□ -0.64
VMP1-211ENST00000591315 SERTAD3Q9UJW9 196 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 PADI1Q9ULC6 663 aa11.05□□□□□ -0.64
VMP1-211ENST00000591315 SCN3AQ9NY46 2000 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 SPTA1P02549 2419 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 OR2A25A4D2G3 310 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 H7BY64 318 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 MEN1O00255 615 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 HAT1O14929 419 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 MAP3K7O43318 606 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 CAPN1P07384 714 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 FURINP09958 794 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 CCDC166P0CW27 439 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 TCN2P20062 427 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 ITGAXP20702 1163 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 CMPK1P30085 196 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 SPRP35270 261 aaPredicted RBP11.04□□□□□ -0.64
VMP1-211ENST00000591315 GCGRP47871 477 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 KCNC1P48547 511 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 SLC12A2P55011 1212 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 UCNP55089 124 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 PRDX1Q06830 199 aaKnown RBP11.04□□□□□ -0.64
VMP1-211ENST00000591315 SP140Q13342 867 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 DNASE1L3Q13609 305 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 SLC9A5Q14940 896 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 SLMAPQ14BN4 828 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 ZKSCAN8Q15776 578 aaPredicted RBP11.04□□□□□ -0.64
VMP1-211ENST00000591315 FBXO48Q5FWF7 155 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 THEMIS2Q5TEJ8 643 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 MROH9Q5TGP6 573 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 ZNF385CQ66K41 422 aaPredicted RBP11.04□□□□□ -0.64
VMP1-211ENST00000591315 ZNF425Q6IV72 752 aa11.04□□□□□ -0.64
VMP1-211ENST00000591315 LRRC8EQ6NSJ5 796 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms