RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	PAIP1	Q9H074	479 aa	Known RBP	13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	TM9SF3	Q9HD45	589 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CCNB1IP1	Q9NPC3	277 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FAM120C	Q9NX05	1096 aa	Known RBP	13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	GALNT8	Q9NY28	637 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SCN3B	Q9NY72	215 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SPG21	Q9NZD8	308 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	EBF1	Q9UH73	591 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PRSS21	Q9Y6M0	314 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	RIF1	Q5UIP0	2472 aa	Known RBP	13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SCN8A	Q9UQD0	1980 aa		13.66	□□□□□ -0.22
NEDD4L-223	ENST00000588516		A0A0J9YVX5	310 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	LOC100130705	A0A1B0GUX0	176 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	RFXANK	O14593	260 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PRKD3	O94806	890 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ITIH1	P19827	911 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	UGT1A1	P22309	533 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	UGT1A4	P22310	534 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	AVPR2	P30518	371 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	UGT1A3	P35503	534 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	UGT1A5	P35504	534 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PPM1A	P35813	382 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	KIR3DL1	P43629	444 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SLC6A12	P48065	614 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	OCA2	Q04671	838 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SPIDR	Q14159	915 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	GBX1	Q14549	363 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PTGR1	Q14914	329 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ACOX1	Q15067	660 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PLCL1	Q15111	1095 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	NEDD8	Q15843	81 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	DUOXA1	Q1HG43	343 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	C18orf21	Q32NC0	220 aa	Predicted RBP	13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SGO1	Q5FBB7	561 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ANXA8L1	Q5VT79	327 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CRTC1	Q6UUV9	634 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ASCL5	Q7RTU5	278 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SLC39A11	Q8N1S5	342 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SVOP	Q8N4V2	548 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	DCBLD1	Q8N8Z6	715 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ASB11	Q8WXH4	323 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FBXL8	Q96CD0	374 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	BOC	Q9BWV1	1114 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	TRIM8	Q9BZR9	551 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	TRIT1	Q9H3H1	467 aa	Known RBP	13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	IGFLR1	Q9H665	355 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FANCE	Q9HB96	536 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ZFP14	Q9HCL3	533 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CD207	Q9UJ71	328 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	RUVBL1	Q9Y265	456 aa	Known RBP	13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	HS3ST2	Q9Y278	367 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	B3GNT3	Q9Y2A9	372 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PCDHGB1	Q9Y5G3	927 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516		V9GYQ6	96 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FAM186A	A6NE01	2351 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ANKRD12	Q6UB98	2062 aa		13.65	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SOBP	A7XYQ1	873 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	HS6ST1	O60243	411 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	GREM1	O60565	184 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	EPN2	O95208	641 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	PDYN	P01213	254 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	ATP1B2	P14415	290 aa	Predicted RBP	13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	JUP	P14923	745 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	PTX3	P26022	381 aa	Predicted RBP	13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	DDX6	P26196	483 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	HNF4A	P41235	474 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	MAGEA2	P43356	314 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	RECQL	P46063	649 aa	Predicted RBP	13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	SERPINB10	P48595	397 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	EMP3	P54852	163 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	C21orf59	P57076	290 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	HTRA4	P83105	476 aa	Predicted RBP	13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	HMGCS1	Q01581	520 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	MVK	Q03426	396 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	LMAN2	Q12907	356 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	TMED1	Q13445	227 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	KEAP1	Q14145	624 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	ZIK1	Q3SY52	487 aa	Predicted RBP	13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	CARD16	Q5EG05	197 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	ZNF691	Q5VV52	312 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	FRG2	Q64ET8	278 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	BRAT1	Q6PJG6	821 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	TBPL2	Q6SJ96	375 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	SPESP1	Q6UW49	350 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	RAVER1	Q8IY67	606 aa	Known RBP	13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	APCDD1	Q8J025	514 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	CLDN19	Q8N6F1	224 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	LKAAEAR1	Q8TD35	194 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	ASZ1	Q8WWH4	475 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	TRUB1	Q8WWH5	349 aa	Known RBP	13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	CLP1	Q92989	425 aa	Known RBP	13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	REPS1	Q96D71	796 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	FCRL1	Q96LA6	429 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	FRG2B	Q96QU4	278 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	ACPT	Q9BZG2	426 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	RAD21L1	Q9H4I0	556 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	EPS8L2	Q9H6S3	715 aa		13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.64	□□□□□ -0.23
NEDD4L-223	ENST00000588516	HECA	Q9UBI9	543 aa	Predicted RBP	13.64	□□□□□ -0.23

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