RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 PROKR1Q8TCW9 393 aa19.8■□□□□ 0.76
CIRBP-209ENST00000586555 APOBEC4Q8WW27 367 aaKnown RBP19.8■□□□□ 0.76
CIRBP-209ENST00000586555 CDKL2Q92772 493 aa19.8■□□□□ 0.76
CIRBP-209ENST00000586555 TRIM44Q96DX7 344 aaPredicted RBP19.8■□□□□ 0.76
CIRBP-209ENST00000586555 HIST1H2AHQ96KK5 128 aa19.8■□□□□ 0.76
CIRBP-209ENST00000586555 HIST1H2AJQ99878 128 aa19.8■□□□□ 0.76
CIRBP-209ENST00000586555 WDR83Q9BRX9 315 aaKnown RBP19.8■□□□□ 0.76
CIRBP-209ENST00000586555 H2AFJQ9BTM1 129 aa19.8■□□□□ 0.76
CIRBP-209ENST00000586555 NLNQ9BYT8 704 aa19.8■□□□□ 0.76
CIRBP-209ENST00000586555 AKIRIN1Q9H9L7 192 aaPredicted RBP19.8■□□□□ 0.76
CIRBP-209ENST00000586555 MRPS30Q9NP92 439 aaKnown RBP19.8■□□□□ 0.76
CIRBP-209ENST00000586555 SAYSD1Q9NPB0 183 aa19.8■□□□□ 0.76
CIRBP-209ENST00000586555 MOCS1Q9NZB8 636 aa19.8■□□□□ 0.76
CIRBP-209ENST00000586555 POLHQ9Y253 713 aa19.8■□□□□ 0.76
CIRBP-209ENST00000586555 KLK4Q9Y5K2 254 aa19.8■□□□□ 0.76
CIRBP-209ENST00000586555 A0A1W2PPV9 198 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 KRT87PA6NCN2 255 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 SLC16A5O15375 505 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 SLC16A8O95907 504 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 PLTPP55058 493 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 CDKN2DP55273 166 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 FASTKQ14296 549 aaKnown RBP19.79■□□□□ 0.76
CIRBP-209ENST00000586555 FASTKD3Q14CZ7 662 aaKnown RBP19.79■□□□□ 0.76
CIRBP-209ENST00000586555 DEFB109BQ30KR1 87 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 RBM20Q5T481 1227 aaKnown RBP19.79■□□□□ 0.76
CIRBP-209ENST00000586555 FCRL6Q6DN72 434 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 C8orf74Q6P047 294 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 SUSD1Q6UWL2 747 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 STRA8Q7Z7C7 330 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 ZNF655Q8N720 491 aaPredicted RBP19.79■□□□□ 0.76
CIRBP-209ENST00000586555 CCDC138Q96M89 665 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 ACAT2Q9BWD1 397 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 TRIM54Q9BYV2 358 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 PHACTR1Q9C0D0 580 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 TXNDC16Q9P2K2 825 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 ANKMY1Q9P2S6 941 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 GPN3Q9UHW5 284 aaPredicted RBP19.79■□□□□ 0.76
CIRBP-209ENST00000586555 PADI2Q9Y2J8 665 aa19.79■□□□□ 0.76
CIRBP-209ENST00000586555 CDC14CA4D256 554 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 H3BMH7 237 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 GSTA2P09210 222 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 PSMB5P28074 263 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 ABATP80404 500 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 DCDP81605 110 aaKnown RBP19.78■□□□□ 0.76
CIRBP-209ENST00000586555 GRM7Q14831 915 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 FAM214AQ32MH5 1076 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 THEMIS2Q5TEJ8 643 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 YOD1Q5VVQ6 348 aaPredicted RBP19.78■□□□□ 0.76
CIRBP-209ENST00000586555 PTRH1Q86Y79 214 aaKnown RBP19.78■□□□□ 0.76
CIRBP-209ENST00000586555 TTC29Q8NA56 475 aaPredicted RBP19.78■□□□□ 0.76
CIRBP-209ENST00000586555 MNS1Q8NEH6 495 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 ZNF480Q8WV37 535 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 THAP4Q8WY91 577 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 LINGO1Q96FE5 620 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 VPS39Q96JC1 886 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 SELENOSQ9BQE4 189 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 DPH7Q9BTV6 452 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 DHRS4Q9BTZ2 278 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 PARVBQ9HBI1 364 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 GRHL1Q9NZI5 618 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 SLC17A6Q9P2U8 582 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 SNX7Q9UNH6 387 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 DOPEY2Q9Y3R5 2298 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 FLNCQ14315 2725 aa19.78■□□□□ 0.76
CIRBP-209ENST00000586555 NAV2Q8IVL1 2488 aa19.77■□□□□ 0.76
CIRBP-209ENST00000586555 E7ENX8 843 aa19.77■□□□□ 0.76
CIRBP-209ENST00000586555 HCRTR1O43613 425 aa19.77■□□□□ 0.76
CIRBP-209ENST00000586555 PIM1P11309 404 aaPredicted RBP19.77■□□□□ 0.76
CIRBP-209ENST00000586555 FDXRP22570 491 aa19.77■□□□□ 0.76
CIRBP-209ENST00000586555 TIAL1Q01085 375 aaKnown RBP eCLIP19.77■□□□□ 0.76
CIRBP-209ENST00000586555 TAP2Q03519 686 aa19.77■□□□□ 0.76
CIRBP-209ENST00000586555 PRDX1Q06830 199 aaKnown RBP19.77■□□□□ 0.76
CIRBP-209ENST00000586555 UGT8Q16880 541 aa19.77■□□□□ 0.76
CIRBP-209ENST00000586555 PTCHD3Q3KNS1 767 aa19.77■□□□□ 0.76
CIRBP-209ENST00000586555 ATP1A1-AS1Q5TC04 95 aa19.77■□□□□ 0.76
CIRBP-209ENST00000586555 CAPN12Q6ZSI9 719 aa19.77■□□□□ 0.76
CIRBP-209ENST00000586555 CYS1Q717R9 158 aa19.77■□□□□ 0.76
CIRBP-209ENST00000586555 ENDOVQ8N8Q3 282 aaKnown RBP19.77■□□□□ 0.76
CIRBP-209ENST00000586555 PCBD2Q9H0N5 130 aa19.77■□□□□ 0.76
CIRBP-209ENST00000586555 TAC3Q9UHF0 121 aa19.77■□□□□ 0.76
CIRBP-209ENST00000586555 ALAS2P22557 587 aa19.76■□□□□ 0.75
CIRBP-209ENST00000586555 SLC12A2P55011 1212 aa19.76■□□□□ 0.75
CIRBP-209ENST00000586555 TLE1Q04724 770 aa19.76■□□□□ 0.75
CIRBP-209ENST00000586555 ICE2Q659A1 982 aa19.76■□□□□ 0.75
CIRBP-209ENST00000586555 C3orf62Q6ZUJ4 267 aa19.76■□□□□ 0.75
CIRBP-209ENST00000586555 ZC3HC1Q86WB0 502 aaKnown RBP19.76■□□□□ 0.75
CIRBP-209ENST00000586555 PPFIBP2Q8ND30 876 aa19.76■□□□□ 0.75
CIRBP-209ENST00000586555 ZFYVE21Q9BQ24 234 aa19.76■□□□□ 0.75
CIRBP-209ENST00000586555 CCDC177Q9NQR7 707 aaPredicted RBP19.76■□□□□ 0.75
CIRBP-209ENST00000586555 ABCF3Q9NUQ8 709 aa19.76■□□□□ 0.75
CIRBP-209ENST00000586555 IFT80Q9P2H3 777 aaPredicted RBP19.76■□□□□ 0.75
CIRBP-209ENST00000586555 DHCR7Q9UBM7 475 aaKnown RBP19.76■□□□□ 0.75
CIRBP-209ENST00000586555 NDOR1Q9UHB4 597 aa19.76■□□□□ 0.75
CIRBP-209ENST00000586555 TCFL5Q9UL49 500 aa19.76■□□□□ 0.75
CIRBP-209ENST00000586555 A0A0J9YVX5 310 aa19.75■□□□□ 0.75
CIRBP-209ENST00000586555 SAT1P21673 171 aa19.75■□□□□ 0.75
CIRBP-209ENST00000586555 CCND1P24385 295 aa19.75■□□□□ 0.75
CIRBP-209ENST00000586555 HRH2P25021 359 aa19.75■□□□□ 0.75
CIRBP-209ENST00000586555 SSTR1P30872 391 aa19.75■□□□□ 0.75
CIRBP-209ENST00000586555 VSX2P58304 361 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms