RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ARL10Q8N8L6 244 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 KDF1Q8NAX2 398 aaPredicted RBP12.24□□□□□ -0.45
VMP1-202ENST00000585847 OR5K2Q8NHB8 316 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 ACTRT2Q8TDY3 377 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 RHBDD1Q8TEB9 315 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 AGAP11Q8TF27 550 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 SETD7Q8WTS6 366 aaKnown RBP12.24□□□□□ -0.45
VMP1-202ENST00000585847 MAELQ96JY0 434 aaKnown RBP12.24□□□□□ -0.45
VMP1-202ENST00000585847 CNDP2Q96KP4 475 aaKnown RBP12.24□□□□□ -0.45
VMP1-202ENST00000585847 NRTNQ99748 197 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 MIPEPQ99797 713 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 HGH1Q9BTY7 390 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 EHD1Q9H4M9 534 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 DNAJC11Q9NVH1 559 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 TOR4AQ9NXH8 423 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 LNPEPQ9UIQ6 1025 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 TRAF6Q9Y4K3 522 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 CFAP20Q9Y6A4 193 aaKnown RBP12.24□□□□□ -0.45
VMP1-202ENST00000585847 RNF215Q9Y6U7 377 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 KIR2DS5A0A0G2JLQ3 304 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 A0A0G2JNG1 304 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 EME2A4GXA9 379 aaPredicted RBP12.23□□□□□ -0.45
VMP1-202ENST00000585847 CCT8L1PA6NM43 557 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 PDZK1P1A8MUH7 402 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 ARHGEF33A8MVX0 844 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 KIR2DS3K7RE56 304 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 ITM2AO43736 263 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 C1orf105O95561 183 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 LDOC1O95751 146 aaPredicted RBP12.23□□□□□ -0.45
VMP1-202ENST00000585847 ALPPL2P10696 532 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 MTHFD1P11586 935 aaKnown RBP12.23□□□□□ -0.45
VMP1-202ENST00000585847 CKMT1AP12532 417 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 FASLGP48023 281 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 RASSF2P50749 326 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 MNAT1P51948 309 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 GTF2H2Q13888 395 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 COL9A2Q14055 689 aaPredicted RBP12.23□□□□□ -0.45
VMP1-202ENST00000585847 KIR2DS5Q14953 304 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 NR1D2Q14995 579 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 NAA25Q14CX7 972 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 CAPN13Q6MZZ7 669 aaPredicted RBP12.23□□□□□ -0.45
VMP1-202ENST00000585847 GTF2H2CQ6P1K8 395 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 ZNF438Q7Z4V0 828 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 FAM9CQ8IZT9 166 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 LSMEM2Q8N112 164 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 DEFB124Q8NES8 71 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 OR9A1PQ8NGU1 263 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 HMGCLL1Q8TB92 370 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 ZCCHC14Q8WYQ9 949 aaKnown RBP12.23□□□□□ -0.45
VMP1-202ENST00000585847 CCT6BQ92526 530 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 METTL2AQ96IZ6 378 aaKnown RBP12.23□□□□□ -0.45
VMP1-202ENST00000585847 C12orf66Q96MD2 445 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 HAUS8Q9BT25 410 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 SCNM1Q9BWG6 230 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 UNKQ9C0B0 810 aaKnown RBP12.23□□□□□ -0.45
VMP1-202ENST00000585847 PITHD1Q9GZP4 211 aaPredicted RBP12.23□□□□□ -0.45
VMP1-202ENST00000585847 RABEP2Q9H5N1 569 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 MEAF6Q9HAF1 191 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 MID1IP1Q9NPA3 183 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 TCF7L2Q9NQB0 619 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 SAR1AQ9NR31 198 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 RIC8BQ9NVN3 520 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 UTP6Q9NYH9 597 aaKnown RBP12.23□□□□□ -0.45
VMP1-202ENST00000585847 ADAMTS6Q9UKP5 1117 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 PADI4Q9UM07 663 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 KCNE2Q9Y6J6 123 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 COLEC10Q9Y6Z7 277 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 BAHCC1Q9P281 2608 aa12.23□□□□□ -0.45
VMP1-202ENST00000585847 IGF2RP11717 2491 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 ATRXP46100 2492 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 NCF1BA6NI72 391 aaPredicted RBP12.22□□□□□ -0.45
VMP1-202ENST00000585847 NCF1CA8MVU1 366 aaPredicted RBP12.22□□□□□ -0.45
VMP1-202ENST00000585847 LYPLA1O75608 230 aaPredicted RBP12.22□□□□□ -0.45
VMP1-202ENST00000585847 KRT6AP02538 564 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 KRT6BP04259 564 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 CHRNGP07510 517 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 ERGP11308 486 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 NCF1P14598 390 aaPredicted RBP12.22□□□□□ -0.45
VMP1-202ENST00000585847 GNAZP19086 355 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 ACP1P24666 158 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 MPSTP25325 297 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 SERPINB1P30740 379 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 HNF4AP41235 474 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 KRT6CP48668 564 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 ACADVLP49748 655 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 CCNG1P51959 295 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 ABRQ12979 859 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 GRB7Q14451 532 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 NR0B2Q15466 257 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 RBBP7Q16576 425 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 LIPJQ5W064 366 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 CES4AQ5XG92 561 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 GLRX5Q86SX6 157 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 ZNF761Q86XN6 746 aaPredicted RBP12.22□□□□□ -0.45
VMP1-202ENST00000585847 OR56A3Q8NH54 315 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 CEP70Q8NHQ1 597 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 MAPK15Q8TD08 544 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 TFGQ92734 400 aaPredicted RBP12.22□□□□□ -0.45
VMP1-202ENST00000585847 DLG3Q92796 817 aa12.22□□□□□ -0.45
VMP1-202ENST00000585847 UBE2E3Q969T4 207 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms