RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 PPP1R3AQ16821 1122 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 GRTP1Q5TC63 336 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 ICE2Q659A1 982 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 ZNF425Q6IV72 752 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 SBSNQ6UWP8 590 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 RNF44Q7L0R7 432 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 MCATQ8IVS2 390 aaKnown RBP15.6■□□□□ 0.09
ERBB2-222ENST00000584908 PPFIBP2Q8ND30 876 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 TTC9Q92623 222 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 N4BP2L2Q92802 583 aaPredicted RBP15.6■□□□□ 0.09
ERBB2-222ENST00000584908 TSPAN17Q96FV3 270 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 UBL7Q96S82 380 aaPredicted RBP15.6■□□□□ 0.09
ERBB2-222ENST00000584908 FMO2Q99518 471 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 DPH2Q9BQC3 489 aaPredicted RBP15.6■□□□□ 0.09
ERBB2-222ENST00000584908 DPH7Q9BTV6 452 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 GPR87Q9BY21 358 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 SPRTNQ9H040 489 aaPredicted RBP15.6■□□□□ 0.09
ERBB2-222ENST00000584908 SLC6A20Q9NP91 592 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 MRPS30Q9NP92 439 aaKnown RBP15.6■□□□□ 0.09
ERBB2-222ENST00000584908 PCMTD2Q9NV79 361 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 NINJ2Q9NZG7 142 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 TAC3Q9UHF0 121 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 KCND3Q9UK17 655 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 IKZF3Q9UKT9 509 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 SRPK3Q9UPE1 567 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 CFAP46Q8IYW2 2715 aa15.6■□□□□ 0.09
ERBB2-222ENST00000584908 ATRXP46100 2492 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 ZNF891A8MT65 544 aaPredicted RBP15.59■□□□□ 0.09
ERBB2-222ENST00000584908 ERVH48-1M5A8F1 160 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 ZSCAN9O15535 394 aaPredicted RBP15.59■□□□□ 0.09
ERBB2-222ENST00000584908 SRPX2O60687 465 aaPredicted RBP15.59■□□□□ 0.09
ERBB2-222ENST00000584908 ITGB2P05107 769 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 KLK3P07288 261 aaPredicted RBP15.59■□□□□ 0.09
ERBB2-222ENST00000584908 CTSBP07858 339 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 HIST1H2AGP0C0S8 130 aaPredicted RBP15.59■□□□□ 0.09
ERBB2-222ENST00000584908 HIST1H2ADP20671 130 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 CCND1P24385 295 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 DLSTP36957 453 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 YBX1P67809 324 aaKnown RBP15.59■□□□□ 0.09
ERBB2-222ENST00000584908 ZNF460Q14592 562 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 TCTE1Q5JU00 501 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 AGTRAPQ6RW13 159 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 CTAGE3PQ8IX95 158 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 LSM14AQ8ND56 463 aaKnown RBP15.59■□□□□ 0.09
ERBB2-222ENST00000584908 CT55Q8WUE5 264 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 ANKRD49Q8WVL7 239 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 IFT81Q8WYA0 676 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 RNF31Q96EP0 1072 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 WBP1Q96G27 269 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 HIST1H2AHQ96KK5 128 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 HIST1H2AJQ99878 128 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 PLCD4Q9BRC7 762 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 H2AFJQ9BTM1 129 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 ACAT2Q9BWD1 397 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 SGPP1Q9BX95 441 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 PCBD2Q9H0N5 130 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 GPAMQ9HCL2 828 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 CCDC177Q9NQR7 707 aaPredicted RBP15.59■□□□□ 0.09
ERBB2-222ENST00000584908 WDR70Q9NW82 654 aa15.59■□□□□ 0.09
ERBB2-222ENST00000584908 FITM1A5D6W6 292 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 CAPN1P07384 714 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 RAB40ALP0C0E4 278 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 TCN2P20062 427 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 SAT1P21673 171 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 HRH2P25021 359 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 SLC12A2P55011 1212 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 TBPL1P62380 186 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 CDKL1Q00532 357 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 MC1RQ01726 317 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 DNASE1L3Q13609 305 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 ZXDCQ2QGD7 858 aaPredicted RBP15.58■□□□□ 0.08
ERBB2-222ENST00000584908 YOD1Q5VVQ6 348 aaPredicted RBP15.58■□□□□ 0.08
ERBB2-222ENST00000584908 FAM199XQ6PEV8 388 aaPredicted RBP15.58■□□□□ 0.08
ERBB2-222ENST00000584908 PCSK4Q6UW60 755 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 MBOAT1Q6ZNC8 495 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 PAQR7Q86WK9 346 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 PPM1NQ8N819 430 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 PROKR1Q8TCW9 393 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 STARD8Q92502 1023 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 FBXL8Q96CD0 374 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 CLIP3Q96DZ5 547 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 UBXN10Q96LJ8 280 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 CYTH2Q99418 400 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 TRIM54Q9BYV2 358 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 DERL2Q9GZP9 239 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 ACSS3Q9H6R3 686 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 SNX7Q9UNH6 387 aa15.58■□□□□ 0.08
ERBB2-222ENST00000584908 NRP2O60462 931 aa15.57■□□□□ 0.08
ERBB2-222ENST00000584908 EZRP15311 586 aaKnown RBP15.57■□□□□ 0.08
ERBB2-222ENST00000584908 STMN1P16949 149 aa15.57■□□□□ 0.08
ERBB2-222ENST00000584908 PHBP35232 272 aa15.57■□□□□ 0.08
ERBB2-222ENST00000584908 CSRP3P50461 194 aa15.57■□□□□ 0.08
ERBB2-222ENST00000584908 USP10Q14694 798 aaKnown RBP15.57■□□□□ 0.08
ERBB2-222ENST00000584908 FBXO42Q6P3S6 717 aa15.57■□□□□ 0.08
ERBB2-222ENST00000584908 IFT20Q8IY31 132 aa15.57■□□□□ 0.08
ERBB2-222ENST00000584908 ZNF655Q8N720 491 aaPredicted RBP15.57■□□□□ 0.08
ERBB2-222ENST00000584908 OR56A3Q8NH54 315 aa15.57■□□□□ 0.08
ERBB2-222ENST00000584908 ATL1Q8WXF7 558 aa15.57■□□□□ 0.08
ERBB2-222ENST00000584908 MR1Q95460 341 aa15.57■□□□□ 0.08
ERBB2-222ENST00000584908 GBP5Q96PP8 586 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms