RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 EURLQ9NYK6 297 aa17.12■□□□□ 0.33
ERBB2-221ENST00000584888 ANKMY1Q9P2S6 941 aa17.12■□□□□ 0.33
ERBB2-221ENST00000584888 PCDHGA9Q9Y5G4 932 aaKnown RBP17.12■□□□□ 0.33
ERBB2-221ENST00000584888 MDC1Q14676 2089 aaKnown RBP17.12■□□□□ 0.33
ERBB2-221ENST00000584888 CLEC18AA5D8T8 446 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 VPS26AO75436 327 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 HBQ1P09105 142 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 PSMB5P28074 263 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 CD97P48960 835 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 SRSF1Q07955 248 aaKnown RBP eCLIP17.11■□□□□ 0.33
ERBB2-221ENST00000584888 PDIA2Q13087 525 aaKnown RBP17.11■□□□□ 0.33
ERBB2-221ENST00000584888 UGT3A1Q6NUS8 523 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 CLEC18BQ6UXF7 455 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 PIWIL4Q7Z3Z4 852 aaKnown RBP17.11■□□□□ 0.33
ERBB2-221ENST00000584888 ANKMY2Q8IV38 441 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 MCATQ8IVS2 390 aaKnown RBP17.11■□□□□ 0.33
ERBB2-221ENST00000584888 LRRC56Q8IYG6 542 aaPredicted RBP17.11■□□□□ 0.33
ERBB2-221ENST00000584888 CPNE9Q8IYJ1 553 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 GPR135Q8IZ08 494 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 RAB42Q8N4Z0 105 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 CLEC18CQ8NCF0 446 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 FBXO36Q8NEA4 188 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 OR2L3Q8NG85 312 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 DLG3Q92796 817 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 NDNQ99608 321 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 INTS7Q9NVH2 962 aaKnown RBP17.11■□□□□ 0.33
ERBB2-221ENST00000584888 TAS2R13Q9NYV9 303 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 AP1M2Q9Y6Q5 423 aa17.11■□□□□ 0.33
ERBB2-221ENST00000584888 TNRC6AQ8NDV7 1962 aaKnown RBP17.1■□□□□ 0.33
ERBB2-221ENST00000584888 OR2B3O76000 313 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 AGXTP21549 392 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 MCM3P25205 808 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 HSD17B2P37059 387 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 YBX1P67809 324 aaKnown RBP17.1■□□□□ 0.33
ERBB2-221ENST00000584888 NCF4Q15080 339 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 RHBDD2Q6NTF9 364 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 TLDC1Q6P9B6 456 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 PAQR3Q6TCH7 311 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 ATCAYQ86WG3 371 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 ZNF480Q8WV37 535 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 EEF1AKMT1Q8WVE0 214 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 SMPDL3AQ92484 453 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 N4BP2L2Q92802 583 aaPredicted RBP17.1■□□□□ 0.33
ERBB2-221ENST00000584888 MIPEPQ99797 713 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 DPH2Q9BQC3 489 aaPredicted RBP17.1■□□□□ 0.33
ERBB2-221ENST00000584888 MCMBPQ9BTE3 642 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 DPH5Q9H2P9 285 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.1■□□□□ 0.33
ERBB2-221ENST00000584888 TRMT6Q9UJA5 497 aaKnown RBP17.1■□□□□ 0.33
ERBB2-221ENST00000584888 CDC23Q9UJX2 597 aa17.1■□□□□ 0.33
ERBB2-221ENST00000584888 CORO1CQ9ULV4 474 aaPredicted RBP17.1■□□□□ 0.33
ERBB2-221ENST00000584888 FLNCQ14315 2725 aa17.09■□□□□ 0.33
ERBB2-221ENST00000584888 TTLL8A6PVC2 850 aa17.09■□□□□ 0.33
ERBB2-221ENST00000584888 E7ENX8 843 aa17.09■□□□□ 0.33
ERBB2-221ENST00000584888 EIF3HO15372 352 aaKnown RBP eCLIP17.09■□□□□ 0.33
ERBB2-221ENST00000584888 CTSVO60911 334 aa17.09■□□□□ 0.33
ERBB2-221ENST00000584888 CEACAM4O75871 244 aa17.09■□□□□ 0.33
ERBB2-221ENST00000584888 TSPAN12O95859 305 aa17.09■□□□□ 0.33
ERBB2-221ENST00000584888 SLC16A8O95907 504 aa17.09■□□□□ 0.33
ERBB2-221ENST00000584888 PNLIPRP1P54315 467 aa17.09■□□□□ 0.33
ERBB2-221ENST00000584888 TAP2Q03519 686 aa17.09■□□□□ 0.33
ERBB2-221ENST00000584888 MGAT5Q09328 741 aa17.09■□□□□ 0.33
ERBB2-221ENST00000584888 NADK2Q4G0N4 442 aa17.09■□□□□ 0.33
ERBB2-221ENST00000584888 GBP5Q96PP8 586 aa17.09■□□□□ 0.33
ERBB2-221ENST00000584888 VWA7Q9Y334 891 aa17.09■□□□□ 0.33
ERBB2-221ENST00000584888 PSAT1Q9Y617 370 aa17.09■□□□□ 0.33
ERBB2-221ENST00000584888 IGKV1-8A0A0C4DH67 115 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 OR2A25A4D2G3 310 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 C9J4A7 227 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 ZSCAN9O15535 394 aaPredicted RBP17.08■□□□□ 0.32
ERBB2-221ENST00000584888 ZBTB14O43829 449 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 ONECUT2O95948 504 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 FDXRP22570 491 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 ZC3H12BQ5HYM0 836 aaKnown RBP17.08■□□□□ 0.32
ERBB2-221ENST00000584888 HECTD2Q5U5R9 776 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 LRRC8EQ6NSJ5 796 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 FBXO42Q6P3S6 717 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 SUSD1Q6UWL2 747 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 UBE2R2Q712K3 238 aaPredicted RBP17.08■□□□□ 0.32
ERBB2-221ENST00000584888 CYS1Q717R9 158 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 MED25Q71SY5 747 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 ZBED8Q8IZ13 594 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 ZNF655Q8N720 491 aaPredicted RBP17.08■□□□□ 0.32
ERBB2-221ENST00000584888 TMEM102Q8N9M5 508 aaPredicted RBP17.08■□□□□ 0.32
ERBB2-221ENST00000584888 FDCSPQ8NFU4 85 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 OLFM1Q99784 485 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 DHRS4Q9BTZ2 278 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 SLC6A20Q9NP91 592 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 PPANQ9NQ55 473 aaKnown RBP17.08■□□□□ 0.32
ERBB2-221ENST00000584888 ADAMTS6Q9UKP5 1117 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 PADI2Q9Y2J8 665 aa17.08■□□□□ 0.32
ERBB2-221ENST00000584888 FITM1A5D6W6 292 aa17.07■□□□□ 0.32
ERBB2-221ENST00000584888 A6NL46 340 aa17.07■□□□□ 0.32
ERBB2-221ENST00000584888 ZNF839A8K0R7 811 aa17.07■□□□□ 0.32
ERBB2-221ENST00000584888 SLC16A5O15375 505 aa17.07■□□□□ 0.32
ERBB2-221ENST00000584888 NRP2O60462 931 aa17.07■□□□□ 0.32
ERBB2-221ENST00000584888 KLF7O75840 302 aaPredicted RBP17.07■□□□□ 0.32
ERBB2-221ENST00000584888 IMPA1P29218 277 aa17.07■□□□□ 0.32
ERBB2-221ENST00000584888 CMPK1P30085 196 aa17.07■□□□□ 0.32
ERBB2-221ENST00000584888 RGS4P49798 205 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms