RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 PSMD3O43242 534 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 PRICKLE3O43900 615 aaPredicted RBP12.71□□□□□ -0.37
COPS3-218ENST00000584216 CTSVO60911 334 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 PHF2O75151 1096 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 VPS26AO75436 327 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 F10P00742 488 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 EIF2S1P05198 315 aaKnown RBP12.71□□□□□ -0.37
COPS3-218ENST00000584216 ANXA5P08758 320 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 PSMA3P25788 255 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 FOXN2P32314 431 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 EEF1A2Q05639 463 aaKnown RBP12.71□□□□□ -0.37
COPS3-218ENST00000584216 ZNF33BQ06732 778 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 PARP6Q2NL67 630 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 P3H1Q32P28 736 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 C11orf63Q6NUN7 778 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 CAVIN1Q6NZI2 390 aaKnown RBP12.71□□□□□ -0.37
COPS3-218ENST00000584216 AFTPHQ6ULP2 937 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 RNF44Q7L0R7 432 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 RAD51AP1Q96B01 352 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 IL17FQ96PD4 163 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 ZFYVE21Q9BQ24 234 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 MESP1Q9BRJ9 268 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 TUBB6Q9BUF5 446 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 ZNF700Q9H0M5 742 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 MCCC2Q9HCC0 563 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 MKKSQ9NPJ1 570 aaPredicted RBP12.71□□□□□ -0.37
COPS3-218ENST00000584216 STMN3Q9NZ72 180 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 TINAGQ9UJW2 476 aa12.71□□□□□ -0.37
COPS3-218ENST00000584216 ZGRF1Q86YA3 2104 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 LOC102723996A0A087X1L8 192 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 A0A0J9YVX5 310 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 RCCD1A6NED2 376 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 MROH6A6NGR9 719 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 TTI1O43156 1089 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 PJA2O43164 708 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 GPC4O75487 556 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 TPH1P17752 444 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 CCR7P32248 378 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 TLE4Q04727 773 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 C3AR1Q16581 482 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 ZNF766Q5HY98 468 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 AARS2Q5JTZ9 985 aaKnown RBP12.7□□□□□ -0.38
COPS3-218ENST00000584216 KCTD11Q693B1 232 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 FRMPD2BQ6IN97 320 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 Q6ZPB1 254 aaPredicted RBP12.7□□□□□ -0.38
COPS3-218ENST00000584216 NEK10Q6ZWH5 1172 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 LINC00523Q86TU6 105 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 LAPTM4BQ86VI4 370 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 SPPL2CQ8IUH8 684 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 OR2L3Q8NG85 312 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 HMGCLL1Q8TB92 370 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 MAGEC3Q8TD91 643 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 METTL21AQ8WXB1 218 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 GPR137Q96N19 417 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 CHP1Q99653 195 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 MIPEPQ99797 713 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 CARD6Q9BX69 1037 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 TGIF2Q9GZN2 237 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 UTP6Q9NYH9 597 aaKnown RBP12.7□□□□□ -0.38
COPS3-218ENST00000584216 ZNF835Q9Y2P0 537 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 MEMO1Q9Y316 297 aa12.7□□□□□ -0.38
COPS3-218ENST00000584216 MDC1Q14676 2089 aaKnown RBP12.69□□□□□ -0.38
COPS3-218ENST00000584216 HIVEP1P15822 2718 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 CCDC162PA2VCL2 907 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 OR51F1A6NGY5 319 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 KPNA5O15131 536 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 CBFA2T2O43439 604 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 OR1I1O60431 355 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 SLCO2B1O94956 709 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 TJP3O95049 919 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 CYC1P08574 325 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 ITGAMP11215 1152 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 CMPK1P30085 196 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 PTPN7P35236 360 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 CCNFP41002 786 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 MARCKSL1P49006 195 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 GRB7Q14451 532 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 GARNL3Q5VVW2 1013 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 DTWD1Q8N5C7 304 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 FAM98AQ8NCA5 519 aaKnown RBP12.69□□□□□ -0.38
COPS3-218ENST00000584216 SKA2Q8WVK7 121 aaPredicted RBP12.69□□□□□ -0.38
COPS3-218ENST00000584216 ZNF354BQ96LW1 612 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 C10orf90Q96M02 699 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 FOPNLQ96NB1 174 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 OSBPL8Q9BZF1 889 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 CIDEBQ9UHD4 219 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 ANKRD12Q6UB98 2062 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 CCDC88CQ9P219 2028 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 SVILO95425 2214 aa12.69□□□□□ -0.38
COPS3-218ENST00000584216 AKAP9Q99996 3911 aa12.68□□□□□ -0.38
COPS3-218ENST00000584216 ZFHX3Q15911 3703 aa12.68□□□□□ -0.38
COPS3-218ENST00000584216 LOC105369274A0A096LPK9 316 aa12.68□□□□□ -0.38
COPS3-218ENST00000584216 LOC102723532A0A0G2JNH3 316 aa12.68□□□□□ -0.38
COPS3-218ENST00000584216 FAM227AF5H4B4 570 aa12.68□□□□□ -0.38
COPS3-218ENST00000584216 C19orf84I3L1E1 186 aa12.68□□□□□ -0.38
COPS3-218ENST00000584216 TXNDC9O14530 226 aa12.68□□□□□ -0.38
COPS3-218ENST00000584216 MED26O95402 600 aa12.68□□□□□ -0.38
COPS3-218ENST00000584216 C8orf89P0DMQ9 161 aa12.68□□□□□ -0.38
COPS3-218ENST00000584216 ANP32AP39687 249 aaKnown RBP12.68□□□□□ -0.38
COPS3-218ENST00000584216 SLC26A3P40879 764 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms