RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 CPNE5Q9HCH3 593 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 VTI1BQ9UEU0 232 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 COL12A1Q99715 3063 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 GOLGA8QA0A0J9YX86 632 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 GOLGA8OA6NCC3 632 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 PABPN1LA6NDY0 278 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 D6RAR5 112 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 GOLGA8NF8WBI6 632 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 H0YHG0 523 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 MATN2O00339 956 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 UBXN7O94888 489 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 CPNE6O95741 557 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 C8GP07360 202 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 TPBGLP0DKB5 382 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 ZNF37AP17032 561 aaPredicted RBP13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 AMD1P17707 334 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 MAP4P27816 1152 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 SHMT2P34897 504 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 CCL7P80098 99 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 TIAL1Q01085 375 aaKnown RBP eCLIP13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 SP140Q13342 867 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 SQSTM1Q13501 440 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 RCN2Q14257 317 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 AMZ1Q400G9 498 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 TECRLQ5HYJ1 363 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 CGB2Q6NT52 195 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 RBM44Q6ZP01 1051 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 OOSP2Q86WS3 158 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 ZNF761Q86XN6 746 aaPredicted RBP13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 CEP97Q8IW35 865 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 PLD6Q8N2A8 252 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 PHC3Q8NDX5 983 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 OR5AR1Q8NGP9 310 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 LCN9Q8WX39 176 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 STON2Q8WXE9 905 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 RAD51AP1Q96B01 352 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 NXNL1Q96CM4 212 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 PDLIM5Q96HC4 596 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 UBXN10Q96LJ8 280 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 DEPDC7Q96QD5 511 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 TBC1D10AQ9BXI6 508 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 TMEM120AQ9BXJ8 343 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 DERL2Q9GZP9 239 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 ILKAPQ9H0C8 392 aaPredicted RBP13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 CPSF2Q9P2I0 782 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 TSR3Q9UJK0 312 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 ZFP69BQ9UJL9 534 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 TDRKHQ9Y2W6 561 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 KNTC1P50748 2209 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 HECTD1Q9ULT8 2610 aa13.06□□□□□ -0.32
CSNK1D-220ENST00000581737 G3V2L1 256 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 TMX2-CTNND1H3BSU7 103 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 NTN3O00634 580 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 SLC16A5O15375 505 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 B4GAT1O43505 415 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 PSIP1O75475 530 aaKnown RBP13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 C1orf105O95561 183 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 S100BP04271 92 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 TFEBP19484 476 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 CAPZBP47756 277 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 GLRBP48167 497 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 CORO7P57737 925 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 NFKB2Q00653 900 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 PRKG2Q13237 762 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 LY6DQ14210 128 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 TBC1D25Q3MII6 688 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 ARMC6Q6NXE6 501 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 WDR74Q6RFH5 385 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 PLXDC1Q8IUK5 500 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 CACTIN-AS1Q8N1I8 211 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 DCBLD1Q8N8Z6 715 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 FBXO15Q8NCQ5 510 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 OR52E1Q8NGJ3 308 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 STAG3L4Q8TBR4 150 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 EEF1AKMT1Q8WVE0 214 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 ASB11Q8WXH4 323 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 CNDP1Q96KN2 507 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 TMEM74Q96NL1 305 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 DRC3Q9H069 523 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 SRMSQ9H3Y6 488 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 SAR1AQ9NR31 198 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 IGSF5Q9NSI5 407 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 DCTN4Q9UJW0 460 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 CLCA2Q9UQC9 943 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 RAP2CQ9Y3L5 183 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 MYO18BQ8IUG5 2567 aa13.05□□□□□ -0.32
CSNK1D-220ENST00000581737 PRAMEF33A0A0G2JMD5 474 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 A0A1W2PQM1 296 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 CFAP73A6NFT4 308 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 ZNF839A8K0R7 811 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 ERVH48-1M5A8F1 160 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 ZBTB14O43829 449 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 IPO13O94829 963 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 EZRP15311 586 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 TYRP1P17643 537 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 CYP2A7P20853 494 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 CD1CP29017 333 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 HSD17B2P37059 387 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 RAB28P51157 221 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms