RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 STOX2Q9P2F5 926 aaPredicted RBP7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 GNPTGQ9UJJ9 305 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 EDARQ9UNE0 448 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 FIGNL2A6NMB9 653 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 A8MUI8 341 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 ISM1B1AKI9 464 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 PES1O00541 588 aaKnown RBP7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 NEURL1O76050 574 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 SP1P08047 785 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 ZNF24P17028 368 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 CD53P19397 219 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 CXCR2P25025 360 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 CHRNA4P43681 627 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 PPP2R2BQ00005 443 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 KEAP1Q14145 624 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 DPYSL3Q14195 570 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 SYCP1Q15431 976 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 CCDC122Q5T0U0 273 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 SHEQ5VZ18 495 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 TMEM205Q6UW68 189 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 MICALCLQ6ZW33 695 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 ZNF227Q86WZ6 799 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 CXorf67Q86X51 503 aaPredicted RBP7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 CRLF3Q8IUI8 442 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 PQLC3Q8N755 202 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 TTC29Q8NA56 475 aaPredicted RBP7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 SIMC1Q8NDZ2 872 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 TP63Q9H3D4 680 aaPredicted RBP7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 PLEKHF2Q9H8W4 249 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 NEUROD4Q9HD90 331 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 HAUS2Q9NVX0 235 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 TAB2Q9NYJ8 693 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 TRPS1Q9UHF7 1281 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 CBLCQ9ULV8 474 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 PLAGL1Q9UM63 463 aa7.26□□□□□ -1.25
SMARCE1-217ENST00000580654 IGHV3-20A0A0C4DH32 117 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 LOC285095A0A1B0GVY8 99 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 HYKKA2RU49 373 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 GOLGA6L4A6NEF3 574 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 AGAP14A8MT82 685 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 IFRD1O00458 451 aaPredicted RBP7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 SMAD7O15105 426 aaKnown RBP7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 NRP2O60462 931 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 CTSVO60911 334 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 CRLF1O75462 422 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 F12P00748 615 aaPredicted RBP7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 KIR2DL3P43628 341 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 DCAF7P61962 342 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 PPIDQ08752 370 aaKnown RBP7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 KRT81Q14533 505 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 KIR2DS3Q14952 304 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 SLC14A2Q15849 920 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 FAM214AQ32MH5 1076 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 TCTE1Q5JU00 501 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 SIRPB2Q5JXA9 342 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 ZNF468Q5VIY5 522 aaPredicted RBP7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 ZDHHC20Q5W0Z9 365 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 FRMPD2BQ6IN97 320 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 SLC25A25Q6KCM7 469 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 HSCBQ8IWL3 235 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 SHISA5Q8N114 240 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 LINC01555Q8NAE3 123 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 TMEM178AQ8NBL3 297 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 MYRIPQ8NFW9 859 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 SREK1Q8WXA9 508 aaKnown RBP7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 ZNF354BQ96LW1 612 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 C10orf90Q96M02 699 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 SRPK1Q96SB4 655 aaKnown RBP7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 OLFM1Q99784 485 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 SELENOSQ9BQE4 189 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 UTP23Q9BRU9 249 aaKnown RBP7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 TUBB6Q9BUF5 446 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 MENTQ9BUN1 341 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 THAP2Q9H0W7 228 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 SLC25A51Q9H1U9 297 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 TRABDQ9H4I3 376 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 UBP1Q9NZI7 540 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 OR6C2Q9NZP2 312 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 TEKT2Q9UIF3 430 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 ATP6V1DQ9Y5K8 247 aa7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 SONP18583 2426 aaKnown RBP7.25□□□□□ -1.25
SMARCE1-217ENST00000580654 MEGF8Q7Z7M0 2845 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 PKD1L1Q8TDX9 2849 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 LOC105369274A0A096LPK9 316 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 LOC102723532A0A0G2JNH3 316 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 A0A0G2JNJ9 132 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 A0A1W2PPR1 153 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 NME2P1O60361 137 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 SEC24DO94855 1032 aaPredicted RBP7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 HEXBP07686 556 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 ICAM2P13598 275 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 TFEBP19484 476 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 FBLP22087 321 aaKnown RBP7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 NME2P22392 152 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 ACADLP28330 430 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 VSX2P58304 361 aaPredicted RBP7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 XIAPP98170 497 aa7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 DAZAP2Q15038 168 aaPredicted RBP7.24□□□□□ -1.25
SMARCE1-217ENST00000580654 TPD52L1Q16890 204 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms