RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 UBXN8O00124 270 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 CDC7O00311 574 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 UBOX5O94941 541 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 MLYCDO95822 493 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 CHEK2O96017 543 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 NTRK1P04629 796 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 HIST1H2AGP0C0S8 130 aaPredicted RBP9.88□□□□□ -0.83
SS18-210ENST00000578700 CCL4P13236 92 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 EZRP15311 586 aaKnown RBP9.88□□□□□ -0.83
SS18-210ENST00000578700 ALOX15P16050 662 aaPredicted RBP9.88□□□□□ -0.83
SS18-210ENST00000578700 VCLP18206 1134 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 HIST1H2ADP20671 130 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 SERPINB3P29508 390 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 GPR1P46091 355 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 ZFP36L1Q07352 338 aaKnown RBP9.88□□□□□ -0.83
SS18-210ENST00000578700 BOP1Q14137 746 aaKnown RBP9.88□□□□□ -0.83
SS18-210ENST00000578700 INPP5AQ14642 412 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 OR4D1Q15615 310 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 ZRSR2Q15696 482 aaKnown RBP9.88□□□□□ -0.83
SS18-210ENST00000578700 WSCD2Q2TBF2 565 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 SH2D4BQ5SQS7 431 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 ZNF678Q5SXM1 525 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 TMEM164Q5U3C3 297 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 METTL21CQ5VZV1 264 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 RAET1GQ6H3X3 334 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 FRMD7Q6ZUT3 714 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 DET1Q7L5Y6 550 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 NLRP8Q86W28 1048 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 OR6C4Q8NGE1 309 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 GIMAP7Q8NHV1 300 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 AGR3Q8TD06 166 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 ELMO1Q92556 727 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 FUBP1Q96AE4 644 aaKnown RBP9.88□□□□□ -0.83
SS18-210ENST00000578700 HIST1H2AHQ96KK5 128 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 TMEM237Q96Q45 408 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 ATOH8Q96SQ7 321 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 HIST1H2AJQ99878 128 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 EGFL8Q99944 293 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 H2AFJQ9BTM1 129 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 C20orf27Q9GZN8 174 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 MYLK2Q9H1R3 596 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 SEMA6CQ9H3T2 930 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 DPEP2Q9H4A9 486 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 COG4Q9H9E3 785 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 KCNK13Q9HB14 408 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 RDH14Q9HBH5 336 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 AKAP7Q9P0M2 348 aaPredicted RBP9.88□□□□□ -0.83
SS18-210ENST00000578700 LRIT1Q9P2V4 623 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 GALPQ9UBC7 116 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 HAO1Q9UJM8 370 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 ACSL6Q9UKU0 697 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 CDYLQ9Y232 598 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 ANGPTL3Q9Y5C1 460 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 PRSS21Q9Y6M0 314 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 NOTCH2Q04721 2471 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 NCF1BA6NI72 391 aaPredicted RBP9.87□□□□□ -0.83
SS18-210ENST00000578700 NCF1CA8MVU1 366 aaPredicted RBP9.87□□□□□ -0.83
SS18-210ENST00000578700 MATN2O00339 956 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 FCHO1O14526 889 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 TOR1BO14657 336 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 TSPAN12O95859 305 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 C8GP07360 202 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 CHRNGP07510 517 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 SERPINA6P08185 405 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 ENO2P09104 434 aaPredicted RBP9.87□□□□□ -0.83
SS18-210ENST00000578700 GSTM1P09488 218 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 MPC1LP0DKB6 136 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 GP1BBP13224 206 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 NCF1P14598 390 aaPredicted RBP9.87□□□□□ -0.83
SS18-210ENST00000578700 GLB1P16278 677 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 CYP2A7P20853 494 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 MPSTP25325 297 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 EEF1DP29692 281 aaKnown RBP9.87□□□□□ -0.83
SS18-210ENST00000578700 PIK3CGP48736 1102 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 IDH3AP50213 366 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 MNAT1P51948 309 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 CORO7P57737 925 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 GSTM4Q03013 218 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 DPTQ07507 201 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 HSPA14Q0VDF9 509 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 LCP2Q13094 533 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 SP140Q13342 867 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 NFATC4Q14934 902 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 CES4AQ5XG92 561 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 BORAQ6PGQ7 559 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 EPGNQ6UW88 154 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 RFLNAQ6ZTI6 216 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 TMPRSS9Q7Z410 1059 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 CLNKQ7Z7G1 428 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 CUZD1Q86UP6 607 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 IL22RA1Q8N6P7 574 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 RCBTB1Q8NDN9 531 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 GPR156Q8NFN8 814 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 OR56A4Q8NGH8 313 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 STON2Q8WXE9 905 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 TMEM159Q96B96 161 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 FOPNLQ96NB1 174 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 SLC30A3Q99726 388 aa9.87□□□□□ -0.83
SS18-210ENST00000578700 MRPL40Q9NQ50 206 aaKnown RBP9.87□□□□□ -0.83
SS18-210ENST00000578700 TCF7L2Q9NQB0 619 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms