RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 ZNF148Q9UQR1 794 aa13.57□□□□□ -0.24
SMARCD2-205ENST00000577686 MAU2Q9Y6X3 613 aa13.57□□□□□ -0.24
SMARCD2-205ENST00000577686 PCM1Q15154 2024 aa13.57□□□□□ -0.24
SMARCD2-205ENST00000577686 SPTBP11277 2137 aa13.57□□□□□ -0.24
SMARCD2-205ENST00000577686 A0A0J9YVX5 310 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 GRID2IPA4D2P6 1211 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 SOWAHDA6NJG2 315 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 CD3EAPO15446 510 aaKnown RBP13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 ZG16O60844 167 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 BMP10O95393 424 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 MLYCDO95822 493 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 SERPINA7P05543 415 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 PKMP14618 531 aaKnown RBP13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 EMP2P54851 167 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 GDF10P55107 478 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 KLF1Q13351 362 aaPredicted RBP13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 ART3Q13508 389 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 RNF187Q5TA31 235 aaPredicted RBP13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 GFRALQ6UXV0 394 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 RNF44Q7L0R7 432 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 SDCCAG8Q86SQ7 713 aaPredicted RBP13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 VRK3Q8IV63 474 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 OR2L3Q8NG85 312 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 DNAJB8Q8NHS0 232 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 NR4A3Q92570 626 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 RELTQ969Z4 430 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 RERGQ96A58 199 aaPredicted RBP13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 ETNK1Q9HBU6 452 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 RAB6BQ9NRW1 208 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 PAK5Q9P286 719 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 CIDEBQ9UHD4 219 aa13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 KLF2Q9Y5W3 355 aaPredicted RBP13.56□□□□□ -0.24
SMARCD2-205ENST00000577686 NUP210LQ5VU65 1888 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 SPENQ96T58 3664 aaKnown RBP13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 C1orf105O95561 183 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 HEXBP07686 556 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 APRTP07741 180 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 RPS3P23396 243 aaKnown RBP eCLIP13.55□□□□□ -0.246e-16■■■□□ 15.8
SMARCD2-205ENST00000577686 ATP5DP30049 168 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 RPA3P35244 121 aaPredicted RBP13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 HSD17B2P37059 387 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 DSG2Q14126 1118 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 GRB7Q14451 532 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 PCID2Q5JVF3 399 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 GARNL3Q5VVW2 1013 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 SP5Q6BEB4 398 aaPredicted RBP13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 MRNIPQ6NTE8 343 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 C4orf22Q6V702 233 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 RPTNQ6XPR3 784 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 ZNF534Q76KX8 674 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 PRSS58Q8IYP2 241 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 KRT222Q8N1A0 295 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 RNF32Q9H0A6 362 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 CHST11Q9NPF2 352 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 MKKSQ9NPJ1 570 aaPredicted RBP13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 BFARQ9NZS9 450 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 PTGFRNQ9P2B2 879 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 TRPC4Q9UBN4 977 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 SLC2A6Q9UGQ3 507 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 DUSP10Q9Y6W6 482 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 PRRC2CQ9Y520 2896 aaKnown RBP13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 SEC16AO15027 2179 aa13.55□□□□□ -0.24
SMARCD2-205ENST00000577686 IGLV3-12A0A075B6K2 115 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 RCCD1A6NED2 376 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 IQCF5A8MTL0 148 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 IDSB3KWA1 339 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 PRICKLE3O43900 615 aaPredicted RBP13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 CTSVO60911 334 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 RASAL1O95294 804 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 PRR35P0CG20 571 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 PTGER4P35408 488 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 BDKRB1P46663 353 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 TNFSF10P50591 281 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 EIF3BP55884 814 aaKnown RBP13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 NDUFA9Q16795 377 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 ANKRD20A4Q4UJ75 823 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 ABHD17BQ5VST6 288 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 ATG9BQ674R7 924 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 TMEM207Q6UWW9 146 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 MICALCLQ6ZW33 695 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 GDF7Q7Z4P5 450 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 CSNK1A1LQ8N752 337 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 LKAAEAR1Q8TD35 194 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 BRIX1Q8TDN6 353 aaKnown RBP13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 METTL21AQ8WXB1 218 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 SMPDL3AQ92484 453 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 HAS2Q92819 552 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 IL22Q9GZX6 179 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 MRPS30Q9NP92 439 aaKnown RBP13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 ABI3Q9P2A4 366 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 DRG1Q9Y295 367 aaKnown RBP13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 VPS9D1Q9Y2B5 631 aa13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 R3HDM2Q9Y2K5 976 aaKnown RBP13.54□□□□□ -0.24
SMARCD2-205ENST00000577686 TRGV8A0A0C4DH27 118 aa13.53□□□□□ -0.24
SMARCD2-205ENST00000577686 A0A1W2PQ72 361 aa13.53□□□□□ -0.24
SMARCD2-205ENST00000577686 OR2A25A4D2G3 310 aa13.53□□□□□ -0.24
SMARCD2-205ENST00000577686 LIASO43766 372 aa13.53□□□□□ -0.24
SMARCD2-205ENST00000577686 KLHL18O94889 574 aa13.53□□□□□ -0.24
SMARCD2-205ENST00000577686 FTCDO95954 541 aa13.53□□□□□ -0.24
SMARCD2-205ENST00000577686 CATP04040 527 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms