RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 CCDC153Q494R4 210 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 FBXO48Q5FWF7 155 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 C3orf38Q5JPI3 329 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 KIAA1614Q5VZ46 1190 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 FIGLAQ6QHK4 219 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 SH2D5Q6ZV89 423 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 THOC6Q86W42 341 aaKnown RBP13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 C17orf64Q86WR6 236 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 MARCH9Q86YJ5 346 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 PTGR2Q8N8N7 351 aaPredicted RBP13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 C19orf47Q8N9M1 422 aaKnown RBP13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 SNX31Q8N9S9 440 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 FLVCR1-AS1Q8TAF5 88 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 KLHL6Q8WZ60 621 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 N4BP2L2Q92802 583 aaPredicted RBP13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 ZUFSPQ96AP4 578 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 ESAMQ96AP7 390 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 PHF21BQ96EK2 531 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 SCNM1Q9BWG6 230 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 SGPP1Q9BX95 441 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 PITPNM3Q9BZ71 974 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 ACBD3Q9H3P7 528 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 VIPAS39Q9H9C1 493 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 MID2Q9UJV3 735 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 PTBP2Q9UKA9 531 aaKnown RBP13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 SLC22A14Q9Y267 594 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 KLHL20Q9Y2M5 609 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 LOXL2Q9Y4K0 774 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 ANGPTL3Q9Y5C1 460 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 KCNE2Q9Y6J6 123 aa13.98□□□□□ -0.17
NPLOC4-218ENST00000574964 TAPBPO15533 448 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 ADRB1P08588 477 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 MTHFD2P13995 350 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 NELFEP18615 380 aaKnown RBP13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 GDF5P43026 501 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 MAPK10P53779 464 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 ALDH18A1P54886 795 aaKnown RBP13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 FOXM1Q08050 763 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 CYB5D1Q6P9G0 228 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 BANPQ8N9N5 519 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 TCTN2Q96GX1 697 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 TMEM79Q9BSE2 394 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 DPH7Q9BTV6 452 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 CAPS2Q9BXY5 557 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 CD244Q9BZW8 370 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 TWSG1Q9GZX9 223 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 TMBIM4Q9HC24 238 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 DNAJC11Q9NVH1 559 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 SEMA5BQ9P283 1151 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 OPTCQ9UBM4 332 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 PISDQ9UG56 409 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 KLK13Q9UKR3 277 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 SNX7Q9UNH6 387 aa13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 TNPO3Q9Y5L0 923 aaKnown RBP13.97□□□□□ -0.17
NPLOC4-218ENST00000574964 SEC16AO15027 2179 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 TARM1B6A8C7 271 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 PLD2O14939 933 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 CLGNO14967 610 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 MYL2P10916 166 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 HGFP14210 728 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 NPPBP16860 134 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 SPINK2P20155 84 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 HRH2P25021 359 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 GGT5P36269 586 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 GRIA3P42263 894 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 SLC6A12P48065 614 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 AGTR2P50052 363 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 ACY1Q03154 408 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 SETDB1Q15047 1291 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 ZXDCQ2QGD7 858 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 CDHR3Q6ZTQ4 885 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 LRRC70Q7Z2Q7 622 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 EXOC3L1Q86VI1 746 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 D2HGDHQ8N465 521 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 SLC5A11Q8WWX8 675 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 SLC41A2Q96JW4 573 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 FANCEQ9HB96 536 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 KCNK9Q9NPC2 374 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 OCIAD1Q9NX40 245 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 MKS1Q9NXB0 559 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 SLC39A1Q9NY26 324 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 ANKMY1Q9P2S6 941 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 SATB2Q9UPW6 733 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 BTRCQ9Y297 605 aa13.96□□□□□ -0.17
NPLOC4-218ENST00000574964 STX16-NPEPL1H3BU86 382 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 H7BY64 318 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 K7EPI3 171 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 STX16O14662 325 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 KLK8O60259 260 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 PLIN3O60664 434 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 PRAMEF10O60809 474 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 PROCP04070 461 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 EBLN1P0CF75 366 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 CDH1P12830 882 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 CCL4P13236 92 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 CREB1P16220 341 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 GNAZP19086 355 aa13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 ATP5F1P24539 256 aaPredicted RBP13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 RBMS1P29558 406 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-218ENST00000574964 GRK3P35626 688 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms