RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 MLYCDO95822 493 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 FHP07954 510 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 USP17L7P0C7H9 530 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 UROSP10746 265 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 NPR3P17342 541 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 POLR2CP19387 275 aaPredicted RBP9.34□□□□□ -0.92
CCDC40-212ENST00000574799 PRDX3P30048 256 aaKnown RBP9.34□□□□□ -0.92
CCDC40-212ENST00000574799 SCNN1GP51170 649 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 KLHL12Q53G59 568 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 CRIPAKQ8N1N5 446 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 YIPF7Q8N8F6 280 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 WDR36Q8NI36 951 aaKnown RBP9.34□□□□□ -0.92
CCDC40-212ENST00000574799 SPPL2AQ8TCT8 520 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 ST6GAL2Q96JF0 529 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 CLEC4MQ9H2X3 399 aaPredicted RBP9.34□□□□□ -0.92
CCDC40-212ENST00000574799 FAM83DQ9H4H8 585 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 ZNF556Q9HAH1 456 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 SP110Q9HB58 689 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 TLR9Q9NR96 1032 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 NPAP1Q9NZP6 1156 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 ZIM2Q9NZV7 527 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 VAPAQ9P0L0 249 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 TRPV2Q9Y5S1 764 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 A0A1W2PQ09 198 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 INPPL1O15357 1258 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 PLOD3O60568 738 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 IGLV3-25P01717 112 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 STSP08842 583 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 CD52P31358 61 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 TNFSF8P32971 234 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 CD86P42081 329 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 AGTR2P50052 363 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 UGT2B15P54855 530 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 RPP38P78345 283 aaKnown RBP9.33□□□□□ -0.92
CCDC40-212ENST00000574799 GNASQ5JWF2 1037 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 VARS2Q5ST30 1063 aaKnown RBP9.33□□□□□ -0.92
CCDC40-212ENST00000574799 KIAA1614Q5VZ46 1190 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 OR2T5Q6IEZ7 315 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 OR2T29Q8NH02 315 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 SLC7A6Q92536 515 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 CCDC32Q9BV29 185 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 TUBB1Q9H4B7 451 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 ABCB8Q9NUT2 735 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 SMPD4Q9NXE4 827 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 EIF2B4Q9UI10 523 aaKnown RBP9.33□□□□□ -0.92
CCDC40-212ENST00000574799 PADI3Q9ULW8 664 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 KIAA1671Q9BY89 1806 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 PABPN1LA6NDY0 278 aaKnown RBP9.33□□□□□ -0.92
CCDC40-212ENST00000574799 NPEPPSL1A6NEC2 478 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 SEPT4O43236 478 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 COL6A1P12109 1028 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 ELNP15502 786 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 CBLP22681 906 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 CYP2C18P33260 490 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 AKR1D1P51857 326 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 CYP4F8P98187 520 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 ESCO2Q56NI9 601 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 FAM26DQ5JW98 314 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 ZNF648Q5T619 568 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-212ENST00000574799 TRIM69Q86WT6 500 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 RIMKLAQ8IXN7 391 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 FAM217AQ8IXS0 508 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 PCNPQ8WW12 178 aaKnown RBP9.33□□□□□ -0.92
CCDC40-212ENST00000574799 SENP8Q96LD8 212 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 CDADC1Q9BWV3 514 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 FBXL12Q9NXK8 326 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 TAS2R13Q9NYV9 303 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 ZNF639Q9UID6 485 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 ZNF222Q9UK12 451 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 PLXNA4Q9HCM2 1894 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 UPK1AO00322 258 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 AKR7A2O43488 359 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 GUCA1CO95843 209 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 IL32P24001 234 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 CREMQ03060 361 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 SV2CQ496J9 727 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 KCTD11Q693B1 232 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 IDO2Q6ZQW0 420 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 GALNT7Q86SF2 657 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 GALNT10Q86SR1 603 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 SLC44A2Q8IWA5 706 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-212ENST00000574799 RIPOR3Q96MK2 946 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 KATNAL1Q9BW62 490 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 DUSP21Q9H596 190 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 SMURF1Q9HCE7 757 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 STOML2Q9UJZ1 356 aa9.33□□□□□ -0.92
CCDC40-212ENST00000574799 CASTOR2A6NHX0 329 aa9.32□□□□□ -0.92
CCDC40-212ENST00000574799 ATP6V1G2-DDX39BF2Z307 99 aa9.32□□□□□ -0.92
CCDC40-212ENST00000574799 SMLR1H3BR10 107 aa9.32□□□□□ -0.92
CCDC40-212ENST00000574799 PER2O15055 1255 aa9.32□□□□□ -0.92
CCDC40-212ENST00000574799 AOC2O75106 756 aa9.32□□□□□ -0.92
CCDC40-212ENST00000574799 CD72P21854 359 aa9.32□□□□□ -0.92
CCDC40-212ENST00000574799 CST5P28325 142 aaPredicted RBP9.32□□□□□ -0.92
CCDC40-212ENST00000574799 AQP1P29972 269 aa9.32□□□□□ -0.92
CCDC40-212ENST00000574799 TAGLNQ01995 201 aaKnown RBP9.32□□□□□ -0.92
CCDC40-212ENST00000574799 FAPQ12884 760 aa9.32□□□□□ -0.92
CCDC40-212ENST00000574799 PTGR1Q14914 329 aa9.32□□□□□ -0.92
CCDC40-212ENST00000574799 MAD2L1BPQ15013 274 aaPredicted RBP9.32□□□□□ -0.92
CCDC40-212ENST00000574799 OR4D1Q15615 310 aa9.32□□□□□ -0.92
CCDC40-212ENST00000574799 STK11Q15831 433 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms