RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 C21orf59P57076 290 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 GGTA1PQ4G0N0 100 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 MPP7Q5T2T1 576 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 ZNF691Q5VV52 312 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 ASTLQ6HA08 431 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-212ENST00000573126 ZNF621Q6ZSS3 439 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 SYT12Q8IV01 421 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 CLECL1Q8IZS7 167 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 L3MBTL4Q8NA19 623 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 GIPC3Q8TF64 312 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 ELMO1Q92556 727 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 BORCS5Q969J3 196 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 CNDP2Q96KP4 475 aaKnown RBP10.89□□□□□ -0.67
RPAIN-212ENST00000573126 MCCC1Q96RQ3 725 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-212ENST00000573126 NODALQ96S42 347 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 TBC1D23Q9NUY8 699 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 DNAJC11Q9NVH1 559 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 PSME2Q9UL46 239 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 HS3ST2Q9Y278 367 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 MYOFQ9NZM1 2061 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 EVPLLA8MZ36 301 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 FPGTO14772 594 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 AXIN1O15169 862 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 TGM5O43548 720 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 ENGP17813 658 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 FMO3P31513 532 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 HNMTP50135 292 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 IRF8Q02556 426 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 TUBA3CQ13748 450 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 SPCS2Q15005 226 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 UGT8Q16880 541 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 ADNP2Q6IQ32 1131 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 GALNT18Q6P9A2 607 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 C16orf87Q6PH81 154 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 HIPK1Q86Z02 1210 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 CPXM2Q8N436 756 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 DNAJB8Q8NHS0 232 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 MCOLN3Q8TDD5 553 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 PLEKHA8Q96JA3 519 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 CAPNS2Q96L46 248 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 DEFB118Q96PH6 123 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 VPS4AQ9UN37 437 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 AP3M1Q9Y2T2 418 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 CORINQ9Y5Q5 1042 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 SNX5Q9Y5X3 404 aa10.89□□□□□ -0.67
RPAIN-212ENST00000573126 CCNDBP1O95273 360 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 ZBTB11O95625 1053 aaPredicted RBP10.88□□□□□ -0.67
RPAIN-212ENST00000573126 CPSF4O95639 269 aaKnown RBP10.88□□□□□ -0.67
RPAIN-212ENST00000573126 HNRNPCP07910 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
RPAIN-212ENST00000573126 COX7A2P14406 83 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 CYP2A7P20853 494 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 MAPK1P28482 360 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 PSMD7P51665 324 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 PFN3P60673 137 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 VLDLRP98155 873 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 AQP6Q13520 282 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 CRTC3Q6UUV7 619 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 Q6ZVL8 140 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 METTL3Q86U44 580 aaKnown RBP10.88□□□□□ -0.67
RPAIN-212ENST00000573126 TMEM25Q86YD3 366 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 PARP8Q8N3A8 854 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 TCAIMQ8N3R3 496 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 SMYD1Q8NB12 490 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 SLAIN1Q8ND83 568 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 PIK3C3Q8NEB9 887 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 NELL1Q92832 810 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 MAGED4Q96JG8 741 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 RHNO1Q9BSD3 238 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 HERC2P3Q9BVR0 1158 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 SLC46A2Q9BY10 475 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 PCDH12Q9NPG4 1184 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 LMCD1Q9NZU5 365 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 SAMD4AQ9UPU9 718 aaKnown RBP10.88□□□□□ -0.67
RPAIN-212ENST00000573126 C5orf42Q9H799 3197 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 E7EQ34 232 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 NEDD8-MDP1E9PL57 170 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 GFYI3L273 518 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 YY2O15391 372 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 ARHGEF15O94989 841 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 FKBP9O95302 570 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 ANGPTL1O95841 491 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 EPHA2P29317 976 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 MAGEA2P43356 314 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 PTPN5P54829 565 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 DEFB103AP81534 67 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 ABRQ12979 859 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 CDK5R2Q13319 367 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 GBX1Q14549 363 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 POM121L1PQ3SYA9 428 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 XKR6Q5GH73 641 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 CDKL4Q5MAI5 379 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 SHQ1Q6PI26 577 aaKnown RBP10.88□□□□□ -0.67
RPAIN-212ENST00000573126 Q6ZNX1 250 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 FKBP9P1Q75LS8 142 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 SLC15A4Q8N697 577 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 LILRA3Q8N6C8 439 aaPredicted RBP10.88□□□□□ -0.67
RPAIN-212ENST00000573126 CSGALNACT1Q8TDX6 532 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 LZICQ8WZA0 190 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 FKBP10Q96AY3 582 aa10.88□□□□□ -0.67
RPAIN-212ENST00000573126 MED8Q96G25 268 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms