RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 STOX2Q9P2F5 926 aaPredicted RBP12.87□□□□□ -0.35
RPAIN-207ENST00000570883 TAC3Q9UHF0 121 aa12.87□□□□□ -0.35
RPAIN-207ENST00000570883 ZNF462Q96JM2 2506 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 OR2A25A4D2G3 310 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 TARM1B6A8C7 271 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 KATNA1O75449 491 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 C1QL1O75973 258 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 TUBB4AP04350 444 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 C8GP07360 202 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 SAT1P21673 171 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 MAGEA4P43358 317 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 IL2P60568 153 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 TBPL1P62380 186 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 NFKB2Q00653 900 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 TSTA3Q13630 321 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-207ENST00000570883 IL10RAQ13651 578 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 ZXDCQ2QGD7 858 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-207ENST00000570883 CRTC2Q53ET0 693 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-207ENST00000570883 TAF1BQ53T94 588 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-207ENST00000570883 UBAP2Q5T6F2 1119 aaKnown RBP12.86□□□□□ -0.35
RPAIN-207ENST00000570883 FAM69BQ5VUD6 431 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 ICE2Q659A1 982 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 FRMPD2BQ6IN97 320 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 RHBDD2Q6NTF9 364 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 C3orf62Q6ZUJ4 267 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 CYS1Q717R9 158 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 RNF44Q7L0R7 432 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 CEP97Q8IW35 865 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 EXD3Q8N9H8 876 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 LSM14AQ8ND56 463 aaKnown RBP12.86□□□□□ -0.35
RPAIN-207ENST00000570883 ZUFSPQ96AP4 578 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 TRIM44Q96DX7 344 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-207ENST00000570883 WBP1Q96G27 269 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 PARVBQ9HBI1 364 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 LRRC4CQ9HCJ2 640 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 ENAMQ9NRM1 1142 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 DHCR7Q9UBM7 475 aaKnown RBP12.86□□□□□ -0.35
RPAIN-207ENST00000570883 KCND3Q9UK17 655 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 MTO1Q9Y2Z2 717 aaKnown RBP12.86□□□□□ -0.35
RPAIN-207ENST00000570883 AP1M2Q9Y6Q5 423 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 TNRC6AQ8NDV7 1962 aaKnown RBP12.86□□□□□ -0.35
RPAIN-207ENST00000570883 SCN3AQ9NY46 2000 aa12.86□□□□□ -0.35
RPAIN-207ENST00000570883 CTAGE15A4D2H0 777 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 ZNF839A8K0R7 811 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 SLC16A5O15375 505 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 CREG1O75629 220 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 WISP3O95389 354 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-207ENST00000570883 KLK3P07288 261 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-207ENST00000570883 GSTA2P09210 222 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 FAM87AP0C7U9 286 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 CTAGE8P0CG41 777 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 ITGAXP20702 1163 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 PTPN4P29074 926 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 CMPK1P30085 196 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 MC1RQ01726 317 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 PRDX1Q06830 199 aaKnown RBP12.85□□□□□ -0.35
RPAIN-207ENST00000570883 EFTUD2Q15029 972 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPAIN-207ENST00000570883 KBTBD12Q3ZCT8 623 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 ZC3H12BQ5HYM0 836 aaKnown RBP12.85□□□□□ -0.35
RPAIN-207ENST00000570883 C1orf189Q5VU69 101 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 ZNF425Q6IV72 752 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 C16orf46Q6P387 395 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 TLDC1Q6P9B6 456 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 SBSNQ6UWP8 590 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 CTAGE6Q86UF2 777 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 PAQR7Q86WK9 346 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 CTAGE4Q8IX94 777 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 DTWD1Q8N5C7 304 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 ENDOVQ8N8Q3 282 aaKnown RBP12.85□□□□□ -0.35
RPAIN-207ENST00000570883 MNS1Q8NEH6 495 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 KIF18AQ8NI77 898 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 ANKRD49Q8WVL7 239 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 PDLIM5Q96HC4 596 aaKnown RBP12.85□□□□□ -0.35
RPAIN-207ENST00000570883 GBP5Q96PP8 586 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 RBBP8Q99708 897 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 CPNE1Q99829 537 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 SELENOSQ9BQE4 189 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 PLCD4Q9BRC7 762 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 GPR87Q9BY21 358 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 CAB39LQ9H9S4 337 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 MRPS30Q9NP92 439 aaKnown RBP12.85□□□□□ -0.35
RPAIN-207ENST00000570883 STARD5Q9NSY2 213 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 ABCF3Q9NUQ8 709 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 CUEDC1Q9NWM3 386 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-207ENST00000570883 SRPK3Q9UPE1 567 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 SH2B3Q9UQQ2 575 aa12.85□□□□□ -0.35
RPAIN-207ENST00000570883 DOCK10Q96BY6 2186 aa12.84□□□□□ -0.35
RPAIN-207ENST00000570883 LOC105369274A0A096LPK9 316 aa12.84□□□□□ -0.35
RPAIN-207ENST00000570883 LOC102723532A0A0G2JNH3 316 aa12.84□□□□□ -0.35
RPAIN-207ENST00000570883 A0A0J9YVX5 310 aa12.84□□□□□ -0.35
RPAIN-207ENST00000570883 TK2O00142 265 aa12.84□□□□□ -0.35
RPAIN-207ENST00000570883 MED26O95402 600 aa12.84□□□□□ -0.35
RPAIN-207ENST00000570883 HBQ1P09105 142 aa12.84□□□□□ -0.35
RPAIN-207ENST00000570883 RAB40ALP0C0E4 278 aa12.84□□□□□ -0.35
RPAIN-207ENST00000570883 ECHS1P30084 290 aa12.84□□□□□ -0.35
RPAIN-207ENST00000570883 GP5P40197 560 aa12.84□□□□□ -0.35
RPAIN-207ENST00000570883 ERV3-1Q14264 604 aa12.84□□□□□ -0.35
RPAIN-207ENST00000570883 SLC9A5Q14940 896 aa12.84□□□□□ -0.35
RPAIN-207ENST00000570883 NCF4Q15080 339 aa12.84□□□□□ -0.35
RPAIN-207ENST00000570883 PPP1R3AQ16821 1122 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms