RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 VSX2P58304 361 aaPredicted RBP10.54□□□□□ -0.72
VPS53-207ENST00000570510 HSF1Q00613 529 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 OC90Q02509 493 aaPredicted RBP10.54□□□□□ -0.72
VPS53-207ENST00000570510 TFDP2Q14188 446 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 MESDQ14696 234 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 BRD3Q15059 726 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 SF1Q15637 639 aaKnown RBP10.54□□□□□ -0.72
VPS53-207ENST00000570510 TAZQ16635 292 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 SYTL3Q4VX76 610 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 WASHC2DQ5SRD0 308 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 RNF10Q8N5U6 811 aaKnown RBP10.54□□□□□ -0.72
VPS53-207ENST00000570510 ACRBPQ8NEB7 543 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 MYRIPQ8NFW9 859 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 RND1Q92730 232 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 ZNF354BQ96LW1 612 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 RNF157Q96PX1 679 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 ALPK1Q96QP1 1244 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 UTP23Q9BRU9 249 aaKnown RBP10.54□□□□□ -0.72
VPS53-207ENST00000570510 UCK2Q9BZX2 261 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 FAM96AQ9H5X1 160 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 DLL4Q9NR61 685 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 TRPC4Q9UBN4 977 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 ZC3H7BQ9UGR2 993 aaKnown RBP10.54□□□□□ -0.72
VPS53-207ENST00000570510 FKBPLQ9UIM3 349 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 CDC14AQ9UNH5 594 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 PLEKHA6Q9Y2H5 1048 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 FAM169AQ9Y6X4 670 aa10.54□□□□□ -0.72
VPS53-207ENST00000570510 ZNF469Q96JG9 3925 aaPredicted RBP10.53□□□□□ -0.72
VPS53-207ENST00000570510 FAM237BA0A1B0GVD1 139 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 LRRD1A4D1F6 860 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 FAM171A2A8MVW0 826 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 LIN7AO14910 233 aaPredicted RBP10.53□□□□□ -0.72
VPS53-207ENST00000570510 ZNHIT1O43257 154 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 SGTAO43765 313 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 SRPX2O60687 465 aaPredicted RBP10.53□□□□□ -0.72
VPS53-207ENST00000570510 SUN1O94901 812 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 HOXD4P09016 255 aaPredicted RBP10.53□□□□□ -0.72
VPS53-207ENST00000570510 GSTM1P09488 218 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 ZNF24P17028 368 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 IGFBP2P18065 325 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 MSX1P28360 303 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 CETN2P41208 172 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 GCGRP47871 477 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 ADAM8P78325 824 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 GSTM4Q03013 218 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 OR1C1Q15619 314 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 MUM1Q2TAK8 710 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 TMEM198Q66K66 360 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 SLC9A4Q6AI14 798 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 FIGLAQ6QHK4 219 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 NAPRTQ6XQN6 538 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 ZNF662Q6ZS27 426 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 TAS2R42Q7RTR8 314 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 LAPTM4BQ86VI4 370 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 KATNAL2Q8IYT4 538 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 RCOR2Q8IZ40 523 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 SYCE1Q8N0S2 351 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 C2orf73Q8N5S3 287 aaPredicted RBP10.53□□□□□ -0.72
VPS53-207ENST00000570510 OR5K2Q8NHB8 316 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 LILRB4Q8NHJ6 448 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 METTL21AQ8WXB1 218 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 C18orf12Q96KH6 178 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 TEKT5Q96M29 485 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 DMRTA2Q96SC8 542 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 SMR3AQ99954 134 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 TUBB6Q9BUF5 446 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 TSGA10Q9BZW7 698 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 NPDC1Q9NQX5 325 aaPredicted RBP10.53□□□□□ -0.72
VPS53-207ENST00000570510 ANKRD10Q9NXR5 420 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 KLHL8Q9P2G9 620 aaPredicted RBP10.53□□□□□ -0.72
VPS53-207ENST00000570510 ALG6Q9Y672 507 aa10.53□□□□□ -0.72
VPS53-207ENST00000570510 C5orf60A6NFR6 353 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 KIAA1324LA8MWY0 1029 aaPredicted RBP10.52□□□□□ -0.73
VPS53-207ENST00000570510 SPOPO43791 374 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 CRTAMO95727 393 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 AP2A1O95782 977 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 ANXA5P08758 320 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 INHBBP09529 407 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 NFKB1P19838 968 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 PTPN3P26045 913 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 PTPN7P35236 360 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 PTGS2P35354 604 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 KIF5AQ12840 1032 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 MPP3Q13368 585 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 TAF1AQ15573 450 aaPredicted RBP10.52□□□□□ -0.73
VPS53-207ENST00000570510 MAPKAPK3Q16644 382 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 BTBD16Q32M84 506 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 ACER2Q5QJU3 275 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 MFSD4BQ5TF39 518 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 FBXW10Q5XX13 1052 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 PID1Q7Z2X4 250 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 SNX20Q7Z614 316 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 CAMKMTQ7Z624 323 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.52□□□□□ -0.73
VPS53-207ENST00000570510 CD163Q86VB7 1156 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 TAX1BP1Q86VP1 789 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 RFX6Q8HWS3 928 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 BEST3Q8N1M1 668 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 DTWD1Q8N5C7 304 aa10.52□□□□□ -0.73
VPS53-207ENST00000570510 PLD5Q8N7P1 536 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms