RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 PIM1P11309 404 aaPredicted RBP13.83□□□□□ -0.2
CMTM3-215ENST00000568477 MCM3P25205 808 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 RPA3P35244 121 aaPredicted RBP13.83□□□□□ -0.2
CMTM3-215ENST00000568477 PAFAH1B1P43034 410 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 VSX2P58304 361 aaPredicted RBP13.83□□□□□ -0.2
CMTM3-215ENST00000568477 MPP1Q00013 466 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 DHX9Q08211 1270 aaKnown RBP13.83□□□□□ -0.2
CMTM3-215ENST00000568477 CUL1Q13616 776 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 TSTA3Q13630 321 aaPredicted RBP13.83□□□□□ -0.2
CMTM3-215ENST00000568477 SSPNQ14714 243 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 NAA30Q147X3 362 aaPredicted RBP13.83□□□□□ -0.2
CMTM3-215ENST00000568477 COLEC12Q5KU26 742 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 MRPL14Q6P1L8 145 aaKnown RBP13.83□□□□□ -0.2
CMTM3-215ENST00000568477 SYDE1Q6ZW31 735 aaPredicted RBP13.83□□□□□ -0.2
CMTM3-215ENST00000568477 RNF44Q7L0R7 432 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 FBXO15Q8NCQ5 510 aaPredicted RBP13.83□□□□□ -0.2
CMTM3-215ENST00000568477 FKBP10Q96AY3 582 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 PTERQ96BW5 349 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 PKP4Q99569 1192 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 GPR21Q99679 349 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 EBNA1BP2Q99848 306 aaKnown RBP13.83□□□□□ -0.2
CMTM3-215ENST00000568477 NAT9Q9BTE0 207 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 ACAT2Q9BWD1 397 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 MLXIPLQ9NP71 852 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 ENAMQ9NRM1 1142 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 SLC22A11Q9NSA0 550 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 MED16Q9Y2X0 877 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 DHRS7Q9Y394 339 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 LRRK2Q5S007 2527 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 A0A0J9YVX5 310 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 OR2A25A4D2G3 310 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 FITM1A5D6W6 292 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 CNOT3O75175 753 aaKnown RBP13.82□□□□□ -0.2
CMTM3-215ENST00000568477 HAUS5O94927 633 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 CCNDBP1O95273 360 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 SYF2O95926 243 aaKnown RBP13.82□□□□□ -0.2
CMTM3-215ENST00000568477 IGHEP01854 428 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 TUBBP07437 444 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 PNLIPRP1P54315 467 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 FOXK1P85037 733 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 FAM214AQ32MH5 1076 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 BBS9Q3SYG4 887 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 SPANXN3Q5MJ09 141 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 WASHC2DQ5SRD0 308 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 TEX35Q5T0J7 233 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 SUSD1Q6UWL2 747 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 KLHL7Q8IXQ5 586 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 CD200R1Q8TD46 325 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 ASB11Q8WXH4 323 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 FER1L6-AS2Q96M78 137 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 RUNDC3BQ96NL0 473 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 AARSD1Q9BTE6 412 aaKnown RBP13.82□□□□□ -0.2
CMTM3-215ENST00000568477 DPH7Q9BTV6 452 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 SLC6A20Q9NP91 592 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 MRPS30Q9NP92 439 aaKnown RBP13.82□□□□□ -0.2
CMTM3-215ENST00000568477 ANKMY1Q9P2S6 941 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.82□□□□□ -0.2
CMTM3-215ENST00000568477 TRMT6Q9UJA5 497 aaKnown RBP13.82□□□□□ -0.2
CMTM3-215ENST00000568477 ZNF451Q9Y4E5 1061 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 PCDHGB7Q9Y5F8 929 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 V9GYY5 206 aaPredicted RBP13.82□□□□□ -0.2
CMTM3-215ENST00000568477 HECTD1Q9ULT8 2610 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 FLNCQ14315 2725 aa13.82□□□□□ -0.2
CMTM3-215ENST00000568477 ANKRD12Q6UB98 2062 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 PTPN13Q12923 2485 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 A6NL46 340 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 EIF3FO00303 357 aaPredicted RBP13.81□□□□□ -0.2
CMTM3-215ENST00000568477 ZBTB14O43829 449 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 NRP2O60462 931 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 BANF1O75531 89 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 SLC16A8O95907 504 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 ONECUT2O95948 504 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 ALBP02768 609 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 UMODP07911 640 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 ERVK-10P10266 1014 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 ITGAXP20702 1163 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 MORF4L2Q15014 288 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 MSS51Q4VC12 460 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 FRMPD2BQ6IN97 320 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 LRRC8EQ6NSJ5 796 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 UGT3A1Q6NUS8 523 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 OVCH1Q7RTY7 1134 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 PIWIL4Q7Z3Z4 852 aaKnown RBP13.81□□□□□ -0.2
CMTM3-215ENST00000568477 PPP1R32Q7Z5V6 425 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 CPNE9Q8IYJ1 553 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 PDIK1LQ8N165 341 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 C2CD4AQ8NCU7 369 aaPredicted RBP13.81□□□□□ -0.2
CMTM3-215ENST00000568477 FDCSPQ8NFU4 85 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 ZNF480Q8WV37 535 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 ZFYVE21Q9BQ24 234 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 WDR54Q9H977 334 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 P4HTMQ9NXG6 502 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 UTP6Q9NYH9 597 aaKnown RBP13.81□□□□□ -0.2
CMTM3-215ENST00000568477 GPR83Q9NYM4 423 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 TAC3Q9UHF0 121 aa13.81□□□□□ -0.2
CMTM3-215ENST00000568477 TNRC6AQ8NDV7 1962 aaKnown RBP13.8□□□□□ -0.2
CMTM3-215ENST00000568477 LOC105369274A0A096LPK9 316 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 LOC102723532A0A0G2JNH3 316 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 HYKKA2RU49 373 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 GFYI3L273 518 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms