RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 NLKQ9UBE8 527 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 ING4Q9UNL4 249 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 MAP4K5Q9Y4K4 846 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 NDST3O95803 873 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 IGFBP6P24592 240 aaPredicted RBP10.63□□□□□ -0.71
PALB2-206ENST00000568219 HCAR3P49019 387 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 ALDH9A1P49189 494 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 STC1P52823 247 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 RHOAP61586 193 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 COX10Q12887 443 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 ARMC12Q5T9G4 340 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 SLC16A12Q6ZSM3 486 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 ZNF598Q86UK7 904 aaKnown RBP10.63□□□□□ -0.71
PALB2-206ENST00000568219 NOXA1Q86UR1 476 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 LGI4Q8N135 537 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 NELL1Q92832 810 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 MAL2Q969L2 176 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 FUBP1Q96AE4 644 aaKnown RBP10.63□□□□□ -0.71
PALB2-206ENST00000568219 TBC1D17Q9HA65 648 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 DNAJC27Q9NZQ0 273 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 RABL2AQ9UBK7 228 aaPredicted RBP10.63□□□□□ -0.71
PALB2-206ENST00000568219 NME7Q9Y5B8 376 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 HS3ST4Q9Y661 456 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 ANKRD36CQ5JPF3 1778 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 LCHNA4D1U4 455 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 SLC35F4A4IF30 521 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 TTC34A8MYJ7 566 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 GABRDO14764 452 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 STK16O75716 305 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 DNAJB5O75953 348 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 RHOCP08134 193 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 ANXA5P08758 320 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 SLC10A3P09131 477 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 ITGALP20701 1170 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 TNFSF8P32971 234 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 GSTM5P46439 218 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.63□□□□□ -0.71
PALB2-206ENST00000568219 C10orf62Q5T681 223 aaPredicted RBP10.63□□□□□ -0.71
PALB2-206ENST00000568219 LIPKQ5VXJ0 399 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 MBOAT1Q6ZNC8 495 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 PRSS48Q7RTY5 328 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 RGL4Q8IZJ4 473 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 BPIFB1Q8TDL5 484 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 GTF2H4Q92759 462 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 NARS2Q96I59 477 aaKnown RBP10.63□□□□□ -0.71
PALB2-206ENST00000568219 PDGFDQ9GZP0 370 aaPredicted RBP10.63□□□□□ -0.71
PALB2-206ENST00000568219 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.63□□□□□ -0.71
PALB2-206ENST00000568219 A0A1W2PQ09 198 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 MEIS3P2A8K0S8 358 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 FAM220BPB1ANY3 271 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 IRAK2O43187 625 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 SSNA1O43805 119 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 TOXO94900 526 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 SLC2A2P11168 524 aaPredicted RBP10.62□□□□□ -0.71
PALB2-206ENST00000568219 DARSP14868 501 aaKnown RBP10.62□□□□□ -0.71
PALB2-206ENST00000568219 DNAJB1P25685 340 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 RPL6Q02878 288 aaKnown RBP10.62□□□□□ -0.71
PALB2-206ENST00000568219 GALNT1Q10472 559 aaPredicted RBP10.62□□□□□ -0.71
PALB2-206ENST00000568219 DPY19L1Q2PZI1 675 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 LCN1P1Q5VSP4 162 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 NXNL2Q5VZ03 156 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 ZNF438Q7Z4V0 828 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 OR6C4Q8NGE1 309 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 DYNC2LI1Q8TCX1 351 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 GPR151Q8TDV0 419 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 VMP1Q96GC9 406 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 MBOAT4Q96T53 435 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 PRAMEF33A0A0G2JMD5 474 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 MAGEB17A8MXT2 336 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 HOXC11O43248 304 aaPredicted RBP10.62□□□□□ -0.71
PALB2-206ENST00000568219 PRAMEF10O60809 474 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 GRK4P32298 578 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 SCNN1AP37088 669 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 PSMD8P48556 350 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 MASP1P48740 699 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 VEPH1Q14D04 833 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 MAD2L1BPQ15013 274 aaPredicted RBP10.62□□□□□ -0.71
PALB2-206ENST00000568219 ZMYND11Q15326 602 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 RGMBQ6NW40 437 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 BHLHB9Q6PI77 547 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 CARNMT1Q8N4J0 409 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 SLC37A3Q8NCC5 494 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 ARRDC4Q8NCT1 418 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 TSPEARQ8WU66 669 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 CNDP2Q96KP4 475 aaKnown RBP10.62□□□□□ -0.71
PALB2-206ENST00000568219 COL21A1Q96P44 957 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 GPBP1L1Q9HC44 474 aaPredicted RBP10.62□□□□□ -0.71
PALB2-206ENST00000568219 TREX1Q9NSU2 369 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 SPIN1Q9Y657 262 aaPredicted RBP10.62□□□□□ -0.71
PALB2-206ENST00000568219 KNL1Q8NG31 2342 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 IGKV6D-21A0A0A0MT36 114 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 B3GALT4O96024 378 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 TRBC1P01850 177 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 CD72P21854 359 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 FEN1P39748 380 aaKnown RBP10.62□□□□□ -0.71
PALB2-206ENST00000568219 SOX3P41225 446 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 BNC1Q01954 994 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 HNRNPA0Q13151 305 aaKnown RBP10.62□□□□□ -0.71
PALB2-206ENST00000568219 PTPRRQ15256 657 aa10.62□□□□□ -0.71
PALB2-206ENST00000568219 DEF8Q6ZN54 512 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms