RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PADI2Q9Y2J8 665 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 SHANK1Q9Y566 2161 aa14.03□□□□□ -0.16
FANCA-220ENST00000566409 USP9YO00507 2555 aaPredicted RBP14.02□□□□□ -0.16
FANCA-220ENST00000566409 A0A0J9YVX5 310 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 A0A1B0GX78 115 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 E7ENX8 843 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 DSCR3O14972 297 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 TP73O15350 636 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 SLC16A8O95907 504 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 ARSFP54793 590 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 VSX2P58304 361 aaPredicted RBP14.02□□□□□ -0.17
FANCA-220ENST00000566409 GNG11P61952 73 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 FOXK1P85037 733 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 TAP2Q03519 686 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 TCTE1Q5JU00 501 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 WASHC2DQ5SRD0 308 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 MED25Q71SY5 747 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 RNF44Q7L0R7 432 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 PPP1R32Q7Z5V6 425 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 CPNE9Q8IYJ1 553 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 RAB42Q8N4Z0 105 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 TMEM102Q8N9M5 508 aaPredicted RBP14.02□□□□□ -0.17
FANCA-220ENST00000566409 FBXO15Q8NCQ5 510 aaPredicted RBP14.02□□□□□ -0.17
FANCA-220ENST00000566409 C2CD4AQ8NCU7 369 aaPredicted RBP14.02□□□□□ -0.17
FANCA-220ENST00000566409 PPFIBP2Q8ND30 876 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 SMPDL3AQ92484 453 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 DLG3Q92796 817 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 C17orf62Q9BQA9 187 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 DPH7Q9BTV6 452 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 STOX2Q9P2F5 926 aaPredicted RBP14.02□□□□□ -0.17
FANCA-220ENST00000566409 NDOR1Q9UHB4 597 aa14.02□□□□□ -0.17
FANCA-220ENST00000566409 GPN3Q9UHW5 284 aaPredicted RBP14.02□□□□□ -0.17
FANCA-220ENST00000566409 A6NL46 340 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 SRPX2O60687 465 aaPredicted RBP14.01□□□□□ -0.17
FANCA-220ENST00000566409 AHSGP02765 367 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 CATP04040 527 aaKnown RBP14.01□□□□□ -0.17
FANCA-220ENST00000566409 MPC1LP0DKB6 136 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 FOLR3P41439 243 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 SKIV2L2P42285 1042 aaKnown RBP14.01□□□□□ -0.17
FANCA-220ENST00000566409 OR1D4P47884 311 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 PGDP52209 483 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 PNLIPRP1P54315 467 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 MLLT10P55197 1068 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 GRM7Q14831 915 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 ARHGAP19Q14CB8 494 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 NKG7Q16617 165 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 NADK2Q4G0N4 442 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 HP1BP3Q5SSJ5 553 aaPredicted RBP14.01□□□□□ -0.17
FANCA-220ENST00000566409 RBM20Q5T481 1227 aaKnown RBP14.01□□□□□ -0.17
FANCA-220ENST00000566409 YOD1Q5VVQ6 348 aaPredicted RBP14.01□□□□□ -0.17
FANCA-220ENST00000566409 OVCH1Q7RTY7 1134 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 PIWIL4Q7Z3Z4 852 aaKnown RBP14.01□□□□□ -0.17
FANCA-220ENST00000566409 RAB43Q86YS6 212 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 KLHL7Q8IXQ5 586 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 METTL27Q8N6F8 245 aaPredicted RBP14.01□□□□□ -0.17
FANCA-220ENST00000566409 CALML6Q8TD86 181 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 PTERQ96BW5 349 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 NDNQ99608 321 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 SPSB2Q99619 263 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 FAM167BQ9BTA0 163 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 CCDC68Q9H2F9 335 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 FAM114A2Q9NRY5 505 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 SLC17A6Q9P2U8 582 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 ZC3H7BQ9UGR2 993 aaKnown RBP14.01□□□□□ -0.17
FANCA-220ENST00000566409 PLAAQ9Y263 795 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 COMMD10Q9Y6G5 202 aa14.01□□□□□ -0.17
FANCA-220ENST00000566409 SPTAN1Q13813 2472 aaKnown RBP14.01□□□□□ -0.17
FANCA-220ENST00000566409 HYKKA2RU49 373 aa14□□□□□ -0.17
FANCA-220ENST00000566409 CD63P08962 238 aa14□□□□□ -0.17
FANCA-220ENST00000566409 ENO3P13929 434 aaPredicted RBP14□□□□□ -0.17
FANCA-220ENST00000566409 CMPK1P30085 196 aa14□□□□□ -0.17
FANCA-220ENST00000566409 PGGT1BP53609 377 aa14□□□□□ -0.17
FANCA-220ENST00000566409 CDKN2DP55273 166 aa14□□□□□ -0.17
FANCA-220ENST00000566409 PRDX1Q06830 199 aaKnown RBP14□□□□□ -0.17
FANCA-220ENST00000566409 RAPSNQ13702 412 aa14□□□□□ -0.17
FANCA-220ENST00000566409 TTLL9Q3SXZ7 439 aa14□□□□□ -0.17
FANCA-220ENST00000566409 BBS9Q3SYG4 887 aa14□□□□□ -0.17
FANCA-220ENST00000566409 SPANXN3Q5MJ09 141 aa14□□□□□ -0.17
FANCA-220ENST00000566409 ICE2Q659A1 982 aa14□□□□□ -0.17
FANCA-220ENST00000566409 ZNF425Q6IV72 752 aa14□□□□□ -0.17
FANCA-220ENST00000566409 PCGF5Q86SE9 256 aa14□□□□□ -0.17
FANCA-220ENST00000566409 PAQR7Q86WK9 346 aa14□□□□□ -0.17
FANCA-220ENST00000566409 CNTN4Q8IWV2 1026 aa14□□□□□ -0.17
FANCA-220ENST00000566409 EEF1AKMT1Q8WVE0 214 aa14□□□□□ -0.17
FANCA-220ENST00000566409 MIB2Q96AX9 1013 aa14□□□□□ -0.17
FANCA-220ENST00000566409 FKBP10Q96AY3 582 aa14□□□□□ -0.17
FANCA-220ENST00000566409 C10orf90Q96M02 699 aa14□□□□□ -0.17
FANCA-220ENST00000566409 PLCD4Q9BRC7 762 aa14□□□□□ -0.17
FANCA-220ENST00000566409 TRIM51Q9BSJ1 452 aa14□□□□□ -0.17
FANCA-220ENST00000566409 SLC26A1Q9H2B4 701 aa14□□□□□ -0.17
FANCA-220ENST00000566409 P4HTMQ9NXG6 502 aa14□□□□□ -0.17
FANCA-220ENST00000566409 CTSFQ9UBX1 484 aa14□□□□□ -0.17
FANCA-220ENST00000566409 TAC3Q9UHF0 121 aa14□□□□□ -0.17
FANCA-220ENST00000566409 ADAMTS6Q9UKP5 1117 aa14□□□□□ -0.17
FANCA-220ENST00000566409 MAST4O15021 2626 aa14□□□□□ -0.17
FANCA-220ENST00000566409 H0YGG7 62 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 TTI1O43156 1089 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 VPS26AO75436 327 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 TTC4O95801 387 aa13.99□□□□□ -0.17
FANCA-220ENST00000566409 SYF2O95926 243 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms