RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 SOX17Q9H6I2 414 aaPredicted RBP16.66■□□□□ 0.26
MAP1LC3B-207ENST00000565788 WDR54Q9H977 334 aa16.66■□□□□ 0.26
MAP1LC3B-207ENST00000565788 ATP13A2Q9NQ11 1180 aa16.66■□□□□ 0.26
MAP1LC3B-207ENST00000565788 FBXO6Q9NRD1 293 aaPredicted RBP16.66■□□□□ 0.26
MAP1LC3B-207ENST00000565788 STOX2Q9P2F5 926 aaPredicted RBP16.66■□□□□ 0.26
MAP1LC3B-207ENST00000565788 MAP10Q9P2G4 905 aa16.66■□□□□ 0.26
MAP1LC3B-207ENST00000565788 ZC3H7BQ9UGR2 993 aaKnown RBP16.66■□□□□ 0.26
MAP1LC3B-207ENST00000565788 CDC23Q9UJX2 597 aa16.66■□□□□ 0.26
MAP1LC3B-207ENST00000565788 FBXL4Q9UKA2 621 aa16.66■□□□□ 0.26
MAP1LC3B-207ENST00000565788 NEU2Q9Y3R4 380 aa16.66■□□□□ 0.26
MAP1LC3B-207ENST00000565788 HS3ST3B1Q9Y662 390 aa16.66■□□□□ 0.26
MAP1LC3B-207ENST00000565788 HEATR5BQ9P2D3 2071 aa16.66■□□□□ 0.26
MAP1LC3B-207ENST00000565788 ESPL1Q14674 2120 aa16.66■□□□□ 0.26
MAP1LC3B-207ENST00000565788 RP1L1Q8IWN7 2480 aaPredicted RBP16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 ZCWPW2A0A1B0GU75 182 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 HYKKA2RU49 373 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 CTAGE9A4FU28 777 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 SDR42E2A6NKP2 422 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 MYO1CO00159 1063 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 SOCS6O14544 535 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 NRDCO43847 1150 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 CATP04040 527 aaKnown RBP16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 ALPPP05187 535 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 SOX8P57073 446 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 CTBP1Q13363 440 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 THOC5Q13769 683 aaKnown RBP16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 CYP1B1Q16678 543 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 PLEKHN1Q494U1 663 aaPredicted RBP16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 CCDC137Q6PK04 289 aaKnown RBP16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 PKP4Q99569 1192 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 ZFYVE21Q9BQ24 234 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 ZBTB20Q9HC78 741 aaPredicted RBP16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 XAB2Q9HCS7 855 aaKnown RBP16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 VPS9D1Q9Y2B5 631 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 MED16Q9Y2X0 877 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 JRKLQ9Y4A0 524 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 MAST4O15021 2626 aa16.65■□□□□ 0.26
MAP1LC3B-207ENST00000565788 MAGEB16A2A368 324 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 VSTM2BA6NLU5 285 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 TCP11X1B4DZS4 312 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 KIF5CO60282 957 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 EIF2S1P05198 315 aaKnown RBP16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 ITGA3P26006 1051 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 RPA3P35244 121 aaPredicted RBP16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 SLC1A2P43004 574 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 MAGEA3P43357 314 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 AIMP2Q13155 320 aaKnown RBP16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 CUL1Q13616 776 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 TSTA3Q13630 321 aaPredicted RBP16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 FHL5Q5TD97 284 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 FBXO42Q6P3S6 717 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 ZNF549Q6P9A3 640 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 REXO1L1PQ8IX06 675 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 PPFIBP2Q8ND30 876 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 SMPDL3AQ92484 453 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 NACC2Q96BF6 587 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 C19orf60Q96EN9 201 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 C10orf90Q96M02 699 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 PSMG3-AS1Q96PY0 264 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 SYNPO2LQ9H987 977 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 MRPS30Q9NP92 439 aaKnown RBP16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 FAM114A2Q9NRY5 505 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 NXT1Q9UKK6 140 aaKnown RBP16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 B3GNT3Q9Y2A9 372 aa16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 MDC1Q14676 2089 aaKnown RBP16.64■□□□□ 0.25
MAP1LC3B-207ENST00000565788 NAV2Q8IVL1 2488 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 IGKV1-8A0A0C4DH67 115 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 PGRMC1O00264 195 aaKnown RBP16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 KLHL41O60662 606 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 IPO13O94829 963 aaKnown RBP16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 AGFG2O95081 481 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 ERVK-10P10266 1014 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 GP1BBP13224 206 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 PNLIPRP1P54315 467 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 MRPL49Q13405 166 aaKnown RBP16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 ARHGAP19Q14CB8 494 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 NAA25Q14CX7 972 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 RBBP7Q16576 425 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 PRTGQ2VWP7 1150 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 TTLL9Q3SXZ7 439 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 PRAMEF13Q5VWM6 474 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 KIRREL2Q6UWL6 708 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 IGFL3Q6UXB1 125 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 NEK10Q6ZWH5 1172 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 NAT8LQ8N9F0 302 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 COG1Q8WTW3 980 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 INPP5DQ92835 1189 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 SNRNP40Q96DI7 357 aaKnown RBP16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 PLCD4Q9BRC7 762 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 CCDC68Q9H2F9 335 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 ZNF304Q9HCX3 659 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 SEMA3GQ9NS98 782 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 TAC3Q9UHF0 121 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 MAD1L1Q9Y6D9 718 aa16.63■□□□□ 0.25
MAP1LC3B-207ENST00000565788 USP9YO00507 2555 aaPredicted RBP16.62■□□□□ 0.25
MAP1LC3B-207ENST00000565788 H0YGG7 62 aa16.62■□□□□ 0.25
MAP1LC3B-207ENST00000565788 PHF2O75151 1096 aa16.62■□□□□ 0.25
MAP1LC3B-207ENST00000565788 SLC16A8O95907 504 aa16.62■□□□□ 0.25
MAP1LC3B-207ENST00000565788 MPC1LP0DKB6 136 aa16.62■□□□□ 0.25
MAP1LC3B-207ENST00000565788 VARSP26640 1264 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms