RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 RPA3P35244 121 aaPredicted RBP13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 PMS2P54278 862 aa13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 VSX2P58304 361 aaPredicted RBP13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 DCDP81605 110 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 ZNF385CQ66K41 422 aaPredicted RBP13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 RHBDD2Q6NTF9 364 aa13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 TLDC1Q6P9B6 456 aa13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 TTLL10Q6ZVT0 673 aa13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 PIWIL4Q7Z3Z4 852 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 ANKMY2Q8IV38 441 aa13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 TMEM151BQ8IW70 566 aa13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 CNTN4Q8IWV2 1026 aa13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 FBXO36Q8NEA4 188 aa13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 CERS2Q96G23 380 aa13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 PKP4Q99569 1192 aa13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 SELENOSQ9BQE4 189 aa13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 AARSD1Q9BTE6 412 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 SPATA7Q9P0W8 599 aa13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 STOX2Q9P2F5 926 aaPredicted RBP13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 DMGDHQ9UI17 866 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 MED16Q9Y2X0 877 aa13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 PTRH2Q9Y3E5 179 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-204ENST00000565023 A0A1W2PPV9 198 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 ESYT3A0FGR9 886 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 A6NL46 340 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 H3BMH7 237 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 SUV39H1O43463 412 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 ZNF500O60304 480 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 CTSVO60911 334 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 VPS26AO75436 327 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 PSIP1O75475 530 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 ATP5DP30049 168 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 CMPK1P30085 196 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 GUCY2DQ02846 1103 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 ATP1A4Q13733 1029 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 NKAIN1Q4KMZ8 207 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 ZC3H12BQ5HYM0 836 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 RBM20Q5T481 1227 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 FRMPD2BQ6IN97 320 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 TRMT10BQ6PF06 316 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 ZBED8Q8IZ13 594 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 DTWD1Q8N5C7 304 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 TTC29Q8NA56 475 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 C2CD4AQ8NCU7 369 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 OR2L3Q8NG85 312 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 THAP4Q8WY91 577 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 INPP5DQ92835 1189 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 GBP5Q96PP8 586 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 ING2Q9H160 280 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 L2HGDHQ9H9P8 463 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 FAM114A2Q9NRY5 505 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 ZDHHC18Q9NUE0 388 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 TAC3Q9UHF0 121 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 TRMT6Q9UJA5 497 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 SRPK3Q9UPE1 567 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 PADI2Q9Y2J8 665 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 DHRS7Q9Y394 339 aa13.07□□□□□ -0.32
VPS9D1-204ENST00000565023 TLN1Q9Y490 2541 aaKnown RBP13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 PCSK5Q92824 1860 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 TEX15Q9BXT5 2789 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 RECKO95980 971 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 MPC1LP0DKB6 136 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 FOLR3P41439 243 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 PGGT1BP53609 377 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 PNLIPRP1P54315 467 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 TLE1Q04724 770 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 RAPSNQ13702 412 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 CYP2A13Q16696 494 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 TEDDM1Q5T9Z0 273 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 THEMIS2Q5TEJ8 643 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 SHISA6Q6ZSJ9 500 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 KIAA0408Q6ZU52 694 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 ASB18Q6ZVZ8 466 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 UBE2R2Q712K3 238 aaPredicted RBP13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 ADCK2Q7Z695 626 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 GALNT7Q86SF2 657 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 RAB43Q86YS6 212 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 OR2A1Q8NGT9 310 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 GABPB2Q8TAK5 448 aaPredicted RBP13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 PROKR1Q8TCW9 393 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 CD200R1Q8TD46 325 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 PYROXD1Q8WU10 500 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 SMPDL3AQ92484 453 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 DLG3Q92796 817 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 KCNJ9Q92806 393 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 ALKBH8Q96BT7 664 aaKnown RBP13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 DPH2Q9BQC3 489 aaPredicted RBP13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 DPH7Q9BTV6 452 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 SLC25A23Q9BV35 468 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 FAM129AQ9BZQ8 928 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 CHRNA10Q9GZZ6 450 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 SLC6A20Q9NP91 592 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 MRPS30Q9NP92 439 aaKnown RBP13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 SAYSD1Q9NPB0 183 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 CUTCQ9NTM9 273 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 MOCS1Q9NZB8 636 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 MAU2Q9Y6X3 613 aa13.06□□□□□ -0.32
VPS9D1-204ENST00000565023 LOC105369274A0A096LPK9 316 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 LOC102723532A0A0G2JNH3 316 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms