RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 DCLRE1AQ6PJP8 1040 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 MSANTD1Q6ZTZ1 278 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 ANKRD46Q86W74 232 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 ZDHHC13Q8IUH4 622 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 PIANPQ8IYJ0 282 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 ADGRG2Q8IZP9 1017 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 WFIKKN2Q8TEU8 576 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 NRG4Q8WWG1 115 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 NELL2Q99435 816 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 CCDC3Q9BQI4 270 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 LMAN2LQ9H0V9 348 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 TM7SF3Q9NS93 570 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 ADPRHL2Q9NX46 363 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 ZNF236Q9UL36 1845 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 A0A0X1KG70 313 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 H3BNC9 293 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 M0R129 80 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CDC7O00311 574 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CLDN4O14493 209 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 PHYHO14832 338 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 ASMTLO95671 621 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 FADS2O95864 444 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 GOT2P00505 430 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 HNRNPA1P09651 372 aaKnown RBP eCLIP3.27□□□□□ -1.89
CHD9-213ENST00000564845 OXTRP30559 389 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 TAS2R39P59534 338 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 C1QTNF8P60827 252 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CAMK2GQ13555 558 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 P4HA3Q7Z4N8 544 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 C11orf96Q7Z7L8 435 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 PROSER1Q86XN7 944 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 EME1Q96AY2 570 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 AURKBQ96GD4 344 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 FAM210AQ96ND0 272 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 MGME1Q9BQP7 344 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CAPN10Q9HC96 672 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 KCNK4Q9NYG8 393 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 NEU3Q9UQ49 428 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CDYLQ9Y232 598 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 RGSL1A5PLK6 1076 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 NPEPPSL1A6NEC2 478 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 F5H5T6 163 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 GALTP07902 379 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 NUDT17P0C025 328 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 ATP6V1C1P21283 382 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 FBXW4P57775 412 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 FAM199XQ6PEV8 388 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 FRMD7Q6ZUT3 714 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 Q6ZVU0 165 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 BEND5Q7L4P6 421 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 C6orf120Q7Z4R8 191 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 COG8Q96MW5 612 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CLSTN3Q9BQT9 956 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 SLC4A5Q9BY07 1137 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 EBF2Q9HAK2 575 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 MYOFQ9NZM1 2061 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 H0Y858 1186 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 BOLA2-SMG1P6H3BVE0 249 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 PDLIM1O00151 329 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 SOCS5O75159 536 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 SNX4O95219 450 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 C9P02748 559 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 PABPC4LP0CB38 370 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 MBL2P11226 248 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 DNAJA1P31689 397 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 BUD31P41223 144 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 TSFMP43897 325 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 YAP1P46937 504 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 MAPKAPK2P49137 400 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 MTTPP55157 894 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 TBX4P57082 545 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 MRPS10P82664 201 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 SMAD3P84022 425 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 PIGFQ07326 219 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 PRKG2Q13237 762 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 DOC2AQ14183 400 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CCSMST1Q4G0I0 132 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 USP39Q53GS9 565 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 TCEAL6Q6IPX3 200 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 BTN2A1Q7KYR7 527 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 KIAA0907Q7Z7F0 614 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 SLC15A3Q8IY34 581 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 COLGALT2Q8IYK4 626 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CHST14Q8NCH0 376 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 SCN2AQ99250 2005 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 SPAG4Q9NPE6 437 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 TAS2R1Q9NYW7 299 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 C5AR2Q9P296 337 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 NUMA1Q14980 2115 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 UBE2QL1A1L167 161 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CCDC85CA6NKD9 419 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 DCLK1O15075 740 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 MT-ND5P03915 603 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 MYF5P13349 255 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 TNFRSF1BP20333 461 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 INHBCP55103 352 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CHRNB3Q05901 458 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 LRP8Q14114 963 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 EIF4HQ15056 248 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 SWT1Q5T5J6 900 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms