RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ACAP2Q15057 778 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 TECRLQ5HYJ1 363 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 ICE2Q659A1 982 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 SUSD1Q6UWL2 747 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 CEACAM20Q6UY09 585 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 TBC1D1Q86TI0 1168 aaPredicted RBP12.91□□□□□ -0.34
CDH1-204ENST00000562118 PAQR7Q86WK9 346 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 PLD6Q8N2A8 252 aaKnown RBP12.91□□□□□ -0.34
CDH1-204ENST00000562118 TMEM151AQ8N4L1 468 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 PPFIBP2Q8ND30 876 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 ACMSDQ8TDX5 336 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 UBLCP1Q8WVY7 318 aaPredicted RBP12.91□□□□□ -0.34
CDH1-204ENST00000562118 USP7Q93009 1102 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 NXNL1Q96CM4 212 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 CABS1Q96KC9 395 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 HIST1H2AHQ96KK5 128 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 OR4K3Q96R72 315 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 HIST1H2AJQ99878 128 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 H2AFJQ9BTM1 129 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 TRIM54Q9BYV2 358 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 ZMYND15Q9H091 742 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 CCDC86Q9H6F5 360 aaKnown RBP12.91□□□□□ -0.34
CDH1-204ENST00000562118 PDE7BQ9NP56 450 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 CCDC177Q9NQR7 707 aaPredicted RBP12.91□□□□□ -0.34
CDH1-204ENST00000562118 INTS7Q9NVH2 962 aaKnown RBP12.91□□□□□ -0.34
CDH1-204ENST00000562118 ARL15Q9NXU5 204 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 LGALS13Q9UHV8 139 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 PTBP2Q9UKA9 531 aaKnown RBP12.91□□□□□ -0.34
CDH1-204ENST00000562118 B3GALT1Q9Y5Z6 326 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 SPTBP11277 2137 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 IQANK1A0A1B0GTG1 560 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 TAPBPO15533 448 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 CDH16O75309 829 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 CCNDBP1O95273 360 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 ANXA5P08758 320 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 NPPBP16860 134 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 TFEBP19484 476 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 HRH2P25021 359 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 RBMS1P29558 406 aaKnown RBP12.9□□□□□ -0.34
CDH1-204ENST00000562118 SLC5A2P31639 672 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 TUBB3Q13509 450 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 KCNAB1Q14722 419 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 FAM83EQ2M2I3 478 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 TAF1BQ53T94 588 aaPredicted RBP12.9□□□□□ -0.34
CDH1-204ENST00000562118 DCAF12Q5T6F0 453 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 LGSNQ5TDP6 509 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 PRAMEF13Q5VWM6 474 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 FIGLAQ6QHK4 219 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 ZNF517Q6ZMY9 492 aaPredicted RBP12.9□□□□□ -0.34
CDH1-204ENST00000562118 RAPH1Q70E73 1250 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 TAX1BP1Q86VP1 789 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 SYTL1Q8IYJ3 562 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 TCAIMQ8N3R3 496 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 RIBC1Q8N443 379 aaPredicted RBP12.9□□□□□ -0.34
CDH1-204ENST00000562118 SPATA6LQ8N4H0 392 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 C2orf73Q8N5S3 287 aaPredicted RBP12.9□□□□□ -0.34
CDH1-204ENST00000562118 ABHD11Q8NFV4 315 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 OR4K1Q8NGD4 311 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 STAG3L4Q8TBR4 150 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 KCTD4Q8WVF5 259 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 FGF11Q92914 225 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 MRRFQ96E11 262 aaKnown RBP12.9□□□□□ -0.34
CDH1-204ENST00000562118 OR6C1Q96RD1 312 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 CCDC77Q9BR77 488 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 PLCD4Q9BRC7 762 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 TMEM79Q9BSE2 394 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 FGF21Q9NSA1 209 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 SLC39A1Q9NY26 324 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 NUDT4Q9NZJ9 180 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 AK5Q9Y6K8 562 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 EPG5Q9HCE0 2579 aa12.9□□□□□ -0.34
CDH1-204ENST00000562118 FITM1A5D6W6 292 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 CCDC151A5D8V7 595 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 POLR1CO15160 346 aaPredicted RBP12.89□□□□□ -0.35
CDH1-204ENST00000562118 CTSVO60911 334 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 IPO13O94829 963 aaKnown RBP12.89□□□□□ -0.35
CDH1-204ENST00000562118 TIAF1O95411 115 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 SYF2O95926 243 aaKnown RBP12.89□□□□□ -0.35
CDH1-204ENST00000562118 SBK3P0C264 359 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 CMPK1P30085 196 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 RPA3P35244 121 aaPredicted RBP12.89□□□□□ -0.35
CDH1-204ENST00000562118 SF1Q15637 639 aaKnown RBP12.89□□□□□ -0.35
CDH1-204ENST00000562118 TSNAXIP1Q2TAA8 658 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 TMTC4Q5T4D3 741 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 SULT1C3Q6IMI6 304 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 CAPN13Q6MZZ7 669 aaPredicted RBP12.89□□□□□ -0.35
CDH1-204ENST00000562118 METTL2BQ6P1Q9 378 aaKnown RBP12.89□□□□□ -0.35
CDH1-204ENST00000562118 FAM129CQ86XR2 697 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 GPSM1Q86YR5 675 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 FAM20CQ8IXL6 584 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 IQCKQ8N0W5 287 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 ARHGEF39Q8N4T4 335 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 HNRNPLLQ8WVV9 542 aaKnown RBP12.89□□□□□ -0.35
CDH1-204ENST00000562118 LRFN5Q96NI6 719 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 MIPEPQ99797 713 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 ROPN1BQ9BZX4 212 aaPredicted RBP12.89□□□□□ -0.35
CDH1-204ENST00000562118 ALG9Q9H6U8 611 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 SYNPO2LQ9H987 977 aa12.89□□□□□ -0.35
CDH1-204ENST00000562118 ROPN1Q9HAT0 212 aaPredicted RBP12.89□□□□□ -0.35
CDH1-204ENST00000562118 COPG2Q9UBF2 871 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms