RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 GPR89BP0CG08 455 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 CHRNB1P11230 501 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 ERGP11308 486 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 SRFP11831 508 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 MYCLP1P12525 358 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 IDO1P14902 403 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 GABRG2P18507 467 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 CAPN3P20807 821 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 PRPH2P23942 346 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 IL12AP29459 219 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 PBLDP30039 288 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 CCR3P51677 355 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 MTTPP55157 894 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 ERVK-8P63133 956 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 PLOD1Q02809 727 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 EMX2Q04743 252 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 PIN1Q13526 163 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 TDGQ13569 410 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 CUL3Q13618 768 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 FASTKQ14296 549 aaKnown RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 KPNB1Q14974 876 aaKnown RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 KIAA0040Q15053 153 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 TAF11Q15544 211 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 SMU1Q2TAY7 513 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 FBXO43Q4G163 708 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 SYTL3Q4VX76 610 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 PDCD4Q53EL6 469 aaKnown RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 AGKQ53H12 422 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 METRNLQ641Q3 311 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 CAPRIN2Q6IMN6 1127 aaKnown RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 AGTRAPQ6RW13 159 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 CRTC3Q6UUV7 619 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 UNC5DQ6UXZ4 953 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 LINC00114Q6XXX2 140 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 HACD2Q6Y1H2 254 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 NET1Q7Z628 596 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 PDZD3Q86UT5 571 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 LRRTM4Q86VH4 590 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 THOC6Q86W42 341 aaKnown RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 TRIM69Q86WT6 500 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 TRAPPC5Q8IUR0 188 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 SCUBE1Q8IWY4 988 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 DDIASQ8IXT1 998 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 CELF2-AS1Q8N7Q2 184 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 ENDOVQ8N8Q3 282 aaKnown RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 KYQ8NBH2 561 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 VPS37AQ8NEZ2 397 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 OR14C36Q8NHC7 312 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 RPLP0P6Q8NHW5 317 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 MAGEC3Q8TD91 643 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 TSPEARQ8WU66 669 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 ZNF480Q8WV37 535 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 FAM3CQ92520 227 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 KLK6Q92876 244 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 PYCR2Q96C36 320 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 TUBGCP3Q96CW5 907 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 WDR34Q96EX3 536 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 SIPA1Q96FS4 1042 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 FCRL1Q96LA6 429 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 NPAS2Q99743 824 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 GPATCH1Q9BRR8 931 aaKnown RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 THTPAQ9BU02 230 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 MENTQ9BUN1 341 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 SGPP1Q9BX95 441 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 SLC17A9Q9BYT1 436 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 BTBD1Q9H0C5 482 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 ATG10Q9H0Y0 220 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 CHRDQ9H2X0 955 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 WDR26Q9H7D7 661 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 FARSBQ9NSD9 589 aaKnown RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 DNAJC11Q9NVH1 559 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 TMEM45AQ9NWC5 275 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 ASIC5Q9NY37 505 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 USP36Q9P275 1121 aaKnown RBP6.33□□□□□ -1.4
CAPN3-210ENST00000561817 EBF1Q9UH73 591 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 SLC22A14Q9Y267 594 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 OR1A2Q9Y585 309 aa6.33□□□□□ -1.4
CAPN3-210ENST00000561817 TMEM229AB2RXF0 380 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 CHURC1-FNTBB4DL54 471 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 E7ENX8 843 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 FXYD1O00168 92 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 SLC28A1O00337 649 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 DLL1O00548 723 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 FFAR3O14843 346 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 AIM2O14862 343 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 KMOO15229 486 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 GPR42O15529 346 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 LATO43561 262 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 NRP2O60462 931 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 UGDHO60701 494 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 ENTPD5O75356 428 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 CRCPO75575 148 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 CHEK2O96017 543 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 PDYNP01213 254 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 SNRPB2P08579 225 aaKnown RBP6.32□□□□□ -1.4
CAPN3-210ENST00000561817 HIST1H2AGP0C0S8 130 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-210ENST00000561817 JUPP14923 745 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 HOXB4P17483 251 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-210ENST00000561817 HIST1H2ADP20671 130 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms