RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 SIX5Q8N196 739 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 SPEM1Q8N4L4 309 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 NEIL2Q969S2 332 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 CAMK1GQ96NX5 476 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 HHIPQ96QV1 700 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 HBEGFQ99075 208 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 NPAS2Q99743 824 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 MENTQ9BUN1 341 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 C1orf50Q9BV19 199 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 DENND2DQ9H6A0 471 aaPredicted RBP16.56■□□□□ 0.24
HDDC3-206ENST00000561036 WDR41Q9HAD4 459 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 EBF2Q9HAK2 575 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 SLC52A3Q9NQ40 469 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 SPATA6Q9NWH7 488 aaPredicted RBP16.56■□□□□ 0.24
HDDC3-206ENST00000561036 DGKBQ9Y6T7 804 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 IGHV1OR15-9A0A0B4J2B8 117 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 A0A1W2PP18 115 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 PDZK1P1A8MUH7 402 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 A8MUI8 341 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 H0Y8X5 98 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 NR5A2O00482 541 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 ANKRD28O15084 1053 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 ANGPT2O15123 496 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 LMNAP02545 664 aaKnown RBP16.55■□□□□ 0.24
HDDC3-206ENST00000561036 NDUFS1P28331 727 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 POLR2JP52435 117 aaKnown RBP16.55■□□□□ 0.24
HDDC3-206ENST00000561036 SRP54P61011 504 aaKnown RBP16.55■□□□□ 0.24
HDDC3-206ENST00000561036 UFM1P61960 85 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 PRKG2Q13237 762 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 CLCA4Q14CN2 919 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 KIAA0040Q15053 153 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 RPE65Q16518 533 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 BNC2Q6ZN30 1099 aaPredicted RBP16.55■□□□□ 0.24
HDDC3-206ENST00000561036 Q6ZSR6 202 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 TMPRSS11BQ86T26 416 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 LAS2Q8IYD9 372 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 FBXW8Q8N3Y1 598 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 CAMKK1Q8N5S9 505 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 GLB1L3Q8NCI6 653 aaPredicted RBP16.55■□□□□ 0.24
HDDC3-206ENST00000561036 BIRC7Q96CA5 298 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 MTFMTQ96DP5 389 aaKnown RBP16.55■□□□□ 0.24
HDDC3-206ENST00000561036 SPDL1Q96EA4 605 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 FCRL1Q96LA6 429 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 ZBTB18Q99592 522 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 GPR174Q9BXC1 333 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 FOXQ1Q9C009 403 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 PELI2Q9HAT8 420 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 GPR27Q9NS67 375 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 C2orf42Q9NWW7 574 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 SLC7A8Q9UHI5 535 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 CA5BQ9Y2D0 317 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 PLEKHM1Q9Y4G2 1056 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 POLR3HQ9Y535 204 aaPredicted RBP16.55■□□□□ 0.24
HDDC3-206ENST00000561036 COLEC10Q9Y6Z7 277 aa16.55■□□□□ 0.24
HDDC3-206ENST00000561036 FOXE1O00358 373 aaPredicted RBP16.54■□□□□ 0.24
HDDC3-206ENST00000561036 NPPAP01160 153 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 G6PDP11413 515 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 MTHFD1P11586 935 aaKnown RBP16.54■□□□□ 0.24
HDDC3-206ENST00000561036 RPS9P46781 194 aaKnown RBP16.54■□□□□ 0.24
HDDC3-206ENST00000561036 RAB28P51157 221 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 NEK2P51955 445 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 MTTPP55157 894 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 NME5P56597 212 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 PSME3P61289 254 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 KRT33BQ14525 404 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 SNCBQ16143 134 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 ALG11Q2TAA5 492 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 TPRG1LQ5T0D9 272 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 THEMIS2Q5TEJ8 643 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 PRMT9Q6P2P2 845 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 OR7G3Q8NG95 312 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 PROKR1Q8TCW9 393 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 PDXPQ96GD0 296 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 IL17FQ96PD4 163 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 HOPXQ9BPY8 73 aaPredicted RBP16.54■□□□□ 0.24
HDDC3-206ENST00000561036 IER2Q9BTL4 223 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 PITHD1Q9GZP4 211 aaPredicted RBP16.54■□□□□ 0.24
HDDC3-206ENST00000561036 KIR3DX1Q9H7L2 352 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 TBC1D17Q9HA65 648 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 GID8Q9NWU2 228 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 NMRK1Q9NWW6 199 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 VPS29Q9UBQ0 182 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 ADGRE2Q9UHX3 823 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 PLAGL1Q9UM63 463 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 PPT2Q9UMR5 302 aa16.54■□□□□ 0.24
HDDC3-206ENST00000561036 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.54■□□□□ 0.24
HDDC3-206ENST00000561036 CFAP20Q9Y6A4 193 aaKnown RBP16.54■□□□□ 0.24
HDDC3-206ENST00000561036 A0A1W2PPC4 97 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 EEDO75530 441 aaKnown RBP16.53■□□□□ 0.24
HDDC3-206ENST00000561036 TNFP01375 233 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 CAPN3P20807 821 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 CXCR2P25025 360 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 VARSP26640 1264 aaKnown RBP16.53■□□□□ 0.24
HDDC3-206ENST00000561036 PKLRP30613 574 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 PIK3CBP42338 1070 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 ZFP36L2P47974 494 aaKnown RBP16.53■□□□□ 0.24
HDDC3-206ENST00000561036 FOXM1Q08050 763 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 TSTA3Q13630 321 aaPredicted RBP16.53■□□□□ 0.24
HDDC3-206ENST00000561036 SLBPQ14493 270 aaKnown RBP eCLIP16.53■□□□□ 0.24
HDDC3-206ENST00000561036 USP39Q53GS9 565 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms