RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 FAM169AQ9Y6X4 670 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 OR2A25A4D2G3 310 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 ARHGEF33A8MVX0 844 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 MED26O95402 600 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 ERGP11308 486 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 PKMP14618 531 aaKnown RBP15.49■□□□□ 0.07
SNX1-213ENST00000561026 PAMP19021 973 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 CMPK1P30085 196 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 VPS41P49754 854 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 YBX1P67809 324 aaKnown RBP15.49■□□□□ 0.07
SNX1-213ENST00000561026 NAA25Q14CX7 972 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 ACSBG2Q5FVE4 666 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 CRB2Q5IJ48 1285 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 ANKRD22Q5VYY1 191 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 PRMT9Q6P2P2 845 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 CASC4Q6P4E1 433 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 Q6ZS92 163 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 RNF44Q7L0R7 432 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 CAND1Q86VP6 1230 aaKnown RBP15.49■□□□□ 0.07
SNX1-213ENST00000561026 METTL27Q8N6F8 245 aaPredicted RBP15.49■□□□□ 0.07
SNX1-213ENST00000561026 TRIM56Q9BRZ2 755 aaKnown RBP15.49■□□□□ 0.07
SNX1-213ENST00000561026 DPH7Q9BTV6 452 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 ILKAPQ9H0C8 392 aaPredicted RBP15.49■□□□□ 0.07
SNX1-213ENST00000561026 ZNF304Q9HCX3 659 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 SEMA3GQ9NS98 782 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 VPS9D1Q9Y2B5 631 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 HIVEP3Q5T1R4 2406 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 FAM237BA0A1B0GVD1 139 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 MAGEB16A2A368 324 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 MYO1CO00159 1063 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 ALOX12BO75342 701 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 PSIP1O75475 530 aaKnown RBP15.49■□□□□ 0.07
SNX1-213ENST00000561026 KRT14P02533 472 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 EIF2S1P05198 315 aaKnown RBP15.49■□□□□ 0.07
SNX1-213ENST00000561026 ARHGAP19Q14CB8 494 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 KLHL38Q2WGJ6 581 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 TTC27Q6P3X3 843 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 PRR7Q8TB68 274 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 SMPDL3AQ92484 453 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 INPP5DQ92835 1189 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 ZFYVE21Q9BQ24 234 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 ACAT2Q9BWD1 397 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 FAM114A2Q9NRY5 505 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 INTS10Q9NVR2 710 aaKnown RBP15.49■□□□□ 0.07
SNX1-213ENST00000561026 SAMD15Q9P1V8 674 aa15.49■□□□□ 0.07
SNX1-213ENST00000561026 CNTRLQ7Z7A1 2325 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 SDR42E2A6NKP2 422 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 E5RI56 91 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 CBX6O95503 412 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 MLNP12872 115 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 CLCN7P51798 805 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 DHX34Q14147 1143 aaKnown RBP15.48■□□□□ 0.07
SNX1-213ENST00000561026 NR6A1Q15406 480 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 RBBP7Q16576 425 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 MUM1Q2TAK8 710 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 PRTGQ2VWP7 1150 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 C4orf17Q53FE4 359 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 AGAP7PQ5VUJ5 663 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 SUSD1Q6UWL2 747 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 IGFL2Q6UWQ7 119 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 CUZD1Q86UP6 607 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 OR11G2Q8NGC1 345 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 STT3BQ8TCJ2 826 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 MAGOHBQ96A72 148 aaKnown RBP15.48■□□□□ 0.07
SNX1-213ENST00000561026 VPS50Q96JG6 964 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 AGAP4Q96P64 663 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 PKP4Q99569 1192 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 BARD1Q99728 777 aaKnown RBP15.48■□□□□ 0.07
SNX1-213ENST00000561026 PLCD4Q9BRC7 762 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 MRPS30Q9NP92 439 aaKnown RBP15.48■□□□□ 0.07
SNX1-213ENST00000561026 STOX2Q9P2F5 926 aaPredicted RBP15.48■□□□□ 0.07
SNX1-213ENST00000561026 ZNF282Q9UDV7 671 aaPredicted RBP15.48■□□□□ 0.07
SNX1-213ENST00000561026 PLEKHB1Q9UF11 243 aaPredicted RBP15.48■□□□□ 0.07
SNX1-213ENST00000561026 PPP2R2CQ9Y2T4 447 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 PCDHGA10Q9Y5H3 936 aa15.48■□□□□ 0.07
SNX1-213ENST00000561026 COPG1Q9Y678 874 aaKnown RBP15.48■□□□□ 0.07
SNX1-213ENST00000561026 NOTCH2Q04721 2471 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 IGKV1-8A0A0C4DH67 115 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 H0YGG7 62 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 PHF2O75151 1096 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 USP1O94782 785 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 CATP04040 527 aaKnown RBP15.47■□□□□ 0.07
SNX1-213ENST00000561026 ZGLP1P0C6A0 271 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 RNF224P0DH78 156 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 ERVK-10P10266 1014 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 RPA3P35244 121 aaPredicted RBP15.47■□□□□ 0.07
SNX1-213ENST00000561026 HSD17B2P37059 387 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 GLRBP48167 497 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 CARSP49589 748 aaKnown RBP15.47■□□□□ 0.07
SNX1-213ENST00000561026 EMP3P54852 163 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 ARF3P61204 181 aaPredicted RBP15.47■□□□□ 0.07
SNX1-213ENST00000561026 CCZ1BP86790 482 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 CCZ1P86791 482 aaPredicted RBP15.47■□□□□ 0.07
SNX1-213ENST00000561026 OCA2Q04671 838 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 PRDX1Q06830 199 aaKnown RBP15.47■□□□□ 0.07
SNX1-213ENST00000561026 KLC1Q07866 573 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 TUBB8Q3ZCM7 444 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 IRAK1BP1Q5VVH5 260 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 ZNF470Q6ECI4 717 aa15.47■□□□□ 0.07
SNX1-213ENST00000561026 NEK10Q6ZWH5 1172 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms