RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 NDC1Q9BTX1 674 aa8.68□□□□□ -1.02
SNRPA1-214ENST00000560987 SPRY4Q9C004 299 aa8.68□□□□□ -1.02
SNRPA1-214ENST00000560987 UNKQ9C0B0 810 aaKnown RBP8.68□□□□□ -1.02
SNRPA1-214ENST00000560987 ACTR5Q9H9F9 607 aaPredicted RBP8.68□□□□□ -1.02
SNRPA1-214ENST00000560987 TXLNGQ9NUQ3 528 aa8.68□□□□□ -1.02
SNRPA1-214ENST00000560987 EURLQ9NYK6 297 aa8.68□□□□□ -1.02
SNRPA1-214ENST00000560987 NINJ2Q9NZG7 142 aa8.68□□□□□ -1.02
SNRPA1-214ENST00000560987 NDOR1Q9UHB4 597 aa8.68□□□□□ -1.02
SNRPA1-214ENST00000560987 TAC3Q9UHF0 121 aa8.68□□□□□ -1.02
SNRPA1-214ENST00000560987 TLK1Q9UKI8 766 aa8.68□□□□□ -1.02
SNRPA1-214ENST00000560987 SNX7Q9UNH6 387 aa8.68□□□□□ -1.02
SNRPA1-214ENST00000560987 PCDHB3Q9Y5E6 796 aa8.68□□□□□ -1.02
SNRPA1-214ENST00000560987 APC2O95996 2303 aa8.68□□□□□ -1.02
SNRPA1-214ENST00000560987 A0A0J9YVX5 310 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 NPEPPSL1A6NEC2 478 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 E7ENX8 843 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 CDC7O00311 574 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 PHGDHO43175 533 aaKnown RBP8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 EFSO43281 561 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 PRICKLE3O43900 615 aaPredicted RBP8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 CPNE3O75131 537 aaKnown RBP8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 LIFP15018 202 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 MSH2P43246 934 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 VSX2P58304 361 aaPredicted RBP8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 RAB10P61026 200 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 YBX1P67809 324 aaKnown RBP8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 TAP2Q03519 686 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 PRDX1Q06830 199 aaKnown RBP8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 SP140Q13342 867 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 MAP7Q14244 749 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 CSHL1Q14406 222 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 NAA25Q14CX7 972 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 EFTUD2Q15029 972 aaKnown RBP eCLIP8.67□□□□□ -1.028e-8■■■■■ 27.9
SNRPA1-214ENST00000560987 FREM2Q5SZK8 3169 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 C1orf189Q5VU69 101 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 ICE2Q659A1 982 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 FCRL6Q6DN72 434 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 TLDC1Q6P9B6 456 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 AGTRAPQ6RW13 159 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 ANKRD12Q6UB98 2062 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 MBOAT1Q6ZNC8 495 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 TBC1D1Q86TI0 1168 aaPredicted RBP8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 ZNF655Q8N720 491 aaPredicted RBP8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 HMGCLL1Q8TB92 370 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 ATL1Q8WXF7 558 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 GPR22Q99680 433 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 SELENOSQ9BQE4 189 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 PCBD2Q9H0N5 130 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 CDC42EP4Q9H3Q1 356 aaKnown RBP8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 PRORYQ9H606 182 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 PRM3Q9NNZ6 103 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 LHX9Q9NQ69 397 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 CCDC177Q9NQR7 707 aaPredicted RBP8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 STARD5Q9NSY2 213 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 STOX2Q9P2F5 926 aaPredicted RBP8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 GPN3Q9UHW5 284 aaPredicted RBP8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 CROTQ9UKG9 612 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 AP1M2Q9Y6Q5 423 aa8.67□□□□□ -1.02
SNRPA1-214ENST00000560987 SDK2Q58EX2 2172 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 A0A087WUV0 522 aaPredicted RBP8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 A0A1W2PPV9 198 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 NCF1BA6NI72 391 aaPredicted RBP8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 NCF1CA8MVU1 366 aaPredicted RBP8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 ESPNB1AK53 854 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 H7BY64 318 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 K7ENP7 123 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 MEN1O00255 615 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 HCRTR1O43613 425 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 SRPX2O60687 465 aaPredicted RBP8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 DLGAP3O95886 979 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 S100BP04271 92 aaPredicted RBP8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 ANXA5P08758 320 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 PRKAR1AP10644 381 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 NCF1P14598 390 aaPredicted RBP8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 ZNF37AP17032 561 aaPredicted RBP8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 CCND1P24385 295 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 IMPA1P29218 277 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 CRABP2P29373 138 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 TYK2P29597 1187 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 STAT5AP42229 794 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 PMS2P54278 862 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 AP1S2P56377 157 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 CYP4F2P78329 520 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 ABATP80404 500 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 TSNQ15631 228 aaKnown RBP8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 PHKG1Q16816 387 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 TAF1BQ53T94 588 aaPredicted RBP8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 TCTE1Q5JU00 501 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 WASHC2DQ5SRD0 308 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 LGSNQ5TDP6 509 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 MLIPQ5VWP3 458 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 CAPN13Q6MZZ7 669 aaPredicted RBP8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 FBXO42Q6P3S6 717 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 INO80CQ6PI98 192 aaPredicted RBP8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 C17orf64Q86WR6 236 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 GPSM1Q86YR5 675 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 RELL1Q8IUW5 271 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 TTC29Q8NA56 475 aaPredicted RBP8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 LRRN4CLQ8ND94 238 aa8.66□□□□□ -1.02
SNRPA1-214ENST00000560987 ANKRD49Q8WVL7 239 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms