RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 GNPDA1P46926 289 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 BAK1Q16611 211 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 PDE12Q6L8Q7 609 aaKnown RBP16.05■□□□□ 0.16
TPM1-228ENST00000560975 GLT6D1Q7Z4J2 308 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 SCD5Q86SK9 330 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 APOBEC3FQ8IUX4 373 aaKnown RBP16.05■□□□□ 0.16
TPM1-228ENST00000560975 UBASH3BQ8TF42 649 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 TRIM63Q969Q1 353 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 TSSK3Q96PN8 268 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 SLA2Q9H6Q3 261 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 LRTM1Q9HBL6 345 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 EXOSC4Q9NPD3 245 aaKnown RBP16.05■□□□□ 0.16
TPM1-228ENST00000560975 MIOSQ9NXC5 875 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 GPRC5BQ9NZH0 403 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 CRNNQ9UBG3 495 aaPredicted RBP16.05■□□□□ 0.16
TPM1-228ENST00000560975 GRIP1Q9Y3R0 1128 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 LOC105371267A0A1B0GV96 52 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 SLITRK5O94991 958 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 OTCP00480 354 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 RPS12P25398 132 aaKnown RBP16.04■□□□□ 0.16
TPM1-228ENST00000560975 S100A3P33764 101 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 MED22Q15528 200 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 TIGD5Q53EQ6 642 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 ZNF648Q5T619 568 aaPredicted RBP16.04■□□□□ 0.16
TPM1-228ENST00000560975 SDHAF4Q5VUM1 108 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 LRRTM3Q86VH5 581 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 TRIM48Q8IWZ4 208 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 RGL4Q8IZJ4 473 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 DNAJC22Q8N4W6 341 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 RASSF5Q8WWW0 418 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 TMCO6Q96DC7 493 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 HSH2DQ96JZ2 352 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 ZYG11BQ9C0D3 744 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 AASDHPPTQ9NRN7 309 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 TOR4AQ9NXH8 423 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 GABRQQ9UN88 632 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 A0A0G2JMP0 313 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 CCNDBP1O95273 360 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 PCSK1P29120 753 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 HTR7P34969 479 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 ST3GAL4Q11206 333 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 TSTQ16762 297 aaKnown RBP16.04■□□□□ 0.16
TPM1-228ENST00000560975 ERAP2Q6P179 960 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 AFTPHQ6ULP2 937 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 PLPP6Q8IY26 295 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 TMEM86AQ8N2M4 240 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 GPR151Q8TDV0 419 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 IGSF8Q969P0 613 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 RNF170Q96K19 258 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 DPH2Q9BQC3 489 aaPredicted RBP16.04■□□□□ 0.16
TPM1-228ENST00000560975 APOL5Q9BWW9 433 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 SERHLQ9NQF3 203 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 NLE1Q9NVX2 485 aaPredicted RBP16.04■□□□□ 0.16
TPM1-228ENST00000560975 SPASTQ9UBP0 616 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 FKBPLQ9UIM3 349 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 PRELID1Q9Y255 219 aa16.04■□□□□ 0.16
TPM1-228ENST00000560975 A0A0X1KG70 313 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 HMX3A6NHT5 357 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 CLCA1A8K7I4 914 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 FAM25AB3EWG3 89 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 FAM25CB3EWG5 89 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 FAM25GB3EWG6 89 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 MEN1O00255 615 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 YES1P07947 543 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 HMBSP08397 361 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 BCKDHAP12694 445 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 YIF1BQ5BJH7 314 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 TEX26Q8N6G2 289 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 GLB1L3Q8NCI6 653 aaPredicted RBP16.03■□□□□ 0.16
TPM1-228ENST00000560975 UTP15Q8TED0 518 aaKnown RBP16.03■□□□□ 0.16
TPM1-228ENST00000560975 OR5M11Q96RB7 305 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 PITX2Q99697 317 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 COQ7Q99807 217 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 EGFL8Q99944 293 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 CCDC32Q9BV29 185 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 DLGAP4Q9Y2H0 992 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 TNS1Q9HBL0 1735 aaKnown RBP16.03■□□□□ 0.16
TPM1-228ENST00000560975 GFRA2O00451 464 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 ULK1O75385 1050 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 ERN1O75460 977 aaKnown RBP16.03■□□□□ 0.16
TPM1-228ENST00000560975 MMP3P08254 477 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 SLC10A3P09131 477 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 BRCC3P46736 316 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 ZNF140P52738 457 aaPredicted RBP16.03■□□□□ 0.16
TPM1-228ENST00000560975 ABHD18Q0P651 414 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 GNASQ5JWF2 1037 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 EFHBQ8N7U6 833 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 MDGA1Q8NFP4 955 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 GRPEL2Q8TAA5 225 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 TADA1Q96BN2 335 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 CEP295NLQ96MC4 621 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 NUDT4Q9NZJ9 180 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 WDR90Q96KV7 1748 aa16.03■□□□□ 0.16
TPM1-228ENST00000560975 RAMP2O60895 175 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 CSF2P04141 144 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 SMIM10L2AP0DMW4 78 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 SMIM10L2BP0DMW5 78 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 IFI30P13284 250 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 RHOQP17081 205 aa16.02■□□□□ 0.16
TPM1-228ENST00000560975 IL1RNP18510 177 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms