RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 PARVBQ9HBI1 364 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 ADAMTS6Q9UKP5 1117 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 TCFL5Q9UL49 500 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 PDE10AQ9Y233 779 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 POLHQ9Y253 713 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 UTP11Q9Y3A2 253 aaKnown RBP12.67□□□□□ -0.38
SMAD3-213ENST00000560175 ZNF462Q96JM2 2506 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 SPTA1P02549 2419 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 HELZ2Q9BYK8 2649 aaKnown RBP12.66□□□□□ -0.38
SMAD3-213ENST00000560175 EIF4E1BA6NMX2 242 aaKnown RBP12.66□□□□□ -0.38
SMAD3-213ENST00000560175 WISP3O95389 354 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-213ENST00000560175 CD63P08962 238 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 GSTA2P09210 222 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 FAM87AP0C7U9 286 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 PRKAR1AP10644 381 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 AGXTP21549 392 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 IMPA1P29218 277 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 CMPK1P30085 196 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 ARSFP54793 590 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 EMP3P54852 163 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 POLE2P56282 527 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 IL2P60568 153 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 ABATP80404 500 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 GUCY2DQ02846 1103 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 ERV3-1Q14264 604 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 NCF4Q15080 339 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 TRADDQ15628 312 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 ZXDCQ2QGD7 858 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-213ENST00000560175 ICE2Q659A1 982 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 C16orf46Q6P387 395 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 SUSD1Q6UWL2 747 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 TMEM207Q6UWW9 146 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 UBE2R2Q712K3 238 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-213ENST00000560175 PAQR7Q86WK9 346 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 ZNF655Q8N720 491 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-213ENST00000560175 FBXO25Q8TCJ0 367 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 MCOLN3Q8TDD5 553 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 PYROXD1Q8WU10 500 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 N4BP2L2Q92802 583 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-213ENST00000560175 C17orf62Q9BQA9 187 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 PLCD4Q9BRC7 762 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 ARHGAP9Q9BRR9 750 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 DPH7Q9BTV6 452 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 RAB17Q9H0T7 212 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 SLC6A20Q9NP91 592 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 PPANQ9NQ55 473 aaKnown RBP12.66□□□□□ -0.38
SMAD3-213ENST00000560175 SMYD2Q9NRG4 433 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 SLC22A11Q9NSA0 550 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 NSMCE4AQ9NXX6 385 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 ZFATQ9P243 1243 aa12.66□□□□□ -0.38
SMAD3-213ENST00000560175 B8ZZF3 427 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 NRP2O60462 931 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 ITGAXP20702 1163 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 SSTR1P30872 391 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 GPX6P59796 221 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 RPS18P62269 152 aaKnown RBP12.65□□□□□ -0.38
SMAD3-213ENST00000560175 DCDP81605 110 aaKnown RBP12.65□□□□□ -0.38
SMAD3-213ENST00000560175 CKAP4Q07065 602 aaKnown RBP12.65□□□□□ -0.38
SMAD3-213ENST00000560175 IL10RAQ13651 578 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 GRM7Q14831 915 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 WHAMMP3Q1A5X7 153 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 PRTGQ2VWP7 1150 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 DEFB109BQ30KR1 87 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 PTCHD3Q3KNS1 767 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 FRMPD2BQ6IN97 320 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 ARHGEF39Q8N4T4 335 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 ENDOVQ8N8Q3 282 aaKnown RBP12.65□□□□□ -0.38
SMAD3-213ENST00000560175 C16orf45Q96MC5 204 aaPredicted RBP12.65□□□□□ -0.38
SMAD3-213ENST00000560175 OR2A5Q96R48 311 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 NDC1Q9BTX1 674 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 SLC25A18Q9H1K4 315 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 RHOJQ9H4E5 214 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 MRPS30Q9NP92 439 aaKnown RBP12.65□□□□□ -0.38
SMAD3-213ENST00000560175 STOX2Q9P2F5 926 aaPredicted RBP12.65□□□□□ -0.38
SMAD3-213ENST00000560175 DHCR7Q9UBM7 475 aaKnown RBP12.65□□□□□ -0.38
SMAD3-213ENST00000560175 TSR3Q9UJK0 312 aaKnown RBP12.65□□□□□ -0.38
SMAD3-213ENST00000560175 PCSK5Q92824 1860 aa12.65□□□□□ -0.38
SMAD3-213ENST00000560175 KCNE1BA0A087WTH5 132 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 LOC105369274A0A096LPK9 316 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 LOC102723532A0A0G2JNH3 316 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 TCRBV9S1A1TA0A576 114 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 FAM159BA6NKW6 160 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 DSCR3O14972 297 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 CNOT3O75175 753 aaKnown RBP12.64□□□□□ -0.39
SMAD3-213ENST00000560175 CCNDBP1O95273 360 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 ALBP02768 609 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 ZNF37AP17032 561 aaPredicted RBP12.64□□□□□ -0.39
SMAD3-213ENST00000560175 HRH2P25021 359 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 RPA3P35244 121 aaPredicted RBP12.64□□□□□ -0.39
SMAD3-213ENST00000560175 PGGT1BP53609 377 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 PMS2P54278 862 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 PLTPP55058 493 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 AP1S2P56377 157 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 TAS2R39P59534 338 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 NFKB2Q00653 900 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 KCNAB2Q13303 367 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 PDAP1Q13442 181 aaKnown RBP12.64□□□□□ -0.39
SMAD3-213ENST00000560175 SSPNQ14714 243 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 PHKG1Q16816 387 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 FAM214AQ32MH5 1076 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms