RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TUBA1CQ9BQE3 449 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 MAGIXQ9H6Y5 334 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 RC3H2Q9HBD1 1191 aaKnown RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 PRM3Q9NNZ6 103 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 PCDH12Q9NPG4 1184 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 SLC25A13Q9UJS0 675 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 ZNF510Q9Y2H8 683 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 MYO1GB0I1T2 1018 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 E7EQ34 232 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 GRM6O15303 877 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 LILRB3O75022 631 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 C8AP07357 584 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 MPC1LP0DKB6 136 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 ENGP17813 658 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 CCNA2P20248 432 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 FSHRP23945 695 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 KIR3DL1P43629 444 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 BDKRB1P46663 353 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 PREPP48147 710 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 PTPN5P54829 565 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 MLLT10P55197 1068 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 WNT3P56703 355 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 ISL1P61371 349 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 RAPSNQ13702 412 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 SIM2Q14190 667 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-216ENST00000559819 MYBPC3Q14896 1274 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 ZNF691Q5VV52 312 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 LAIR1Q6GTX8 287 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 GDPD4Q6W3E5 623 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 ZNF621Q6ZSS3 439 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 Q6ZVL8 140 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 TCAIMQ8N3R3 496 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 LMNTD1Q8N9Z9 388 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 FNDC8Q8TC99 324 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 CYB5D2Q8WUJ1 264 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 SNRNP27Q8WVK2 155 aaKnown RBP9.74□□□□□ -0.85
LRRC28-216ENST00000559819 RDH12Q96NR8 316 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 CCDC90BQ9GZT6 254 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 RIBC2Q9H4K1 309 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 BTBD3Q9Y2F9 522 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 TDRKHQ9Y2W6 561 aaKnown RBP9.74□□□□□ -0.85
LRRC28-216ENST00000559819 TRIM17Q9Y577 477 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 LAMA2P24043 3122 aaKnown RBP9.74□□□□□ -0.85
LRRC28-216ENST00000559819 TRIM64BA6NI03 449 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 ARHGEF33A8MVX0 844 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 GFYI3L273 518 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 SLC1A7O00341 560 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 BCKDKO14874 412 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 ARHGEF15O94989 841 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 INMTO95050 263 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 ETHE1O95571 254 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 POP4O95707 220 aaKnown RBP9.74□□□□□ -0.85
LRRC28-216ENST00000559819 FTH1P02794 183 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 JUPP14923 745 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 PRPH2P23942 346 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 GSTM2P28161 218 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 IL5RAQ01344 420 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 IRF8Q02556 426 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 XKR6Q5GH73 641 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 CDKL4Q5MAI5 379 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 CPZQ66K79 652 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 GTF2IRD2BQ6EKJ0 949 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 DUS1LQ6P1R4 473 aaKnown RBP9.74□□□□□ -0.85
LRRC28-216ENST00000559819 METTL3Q86U44 580 aaKnown RBP9.74□□□□□ -0.85
LRRC28-216ENST00000559819 GTF2IRD2Q86UP8 949 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 ZZZ3Q8IYH5 903 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 OR2A12Q8NGT7 310 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 MCOLN3Q8TDD5 553 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 MED8Q96G25 268 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 CCDC138Q96M89 665 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 PANX1Q96RD7 426 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 LINC00597Q9H2U6 94 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 KLHL42Q9P2K6 505 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 WARS2Q9UGM6 360 aaKnown RBP9.74□□□□□ -0.85
LRRC28-216ENST00000559819 ATP11BQ9Y2G3 1177 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 DGKBQ9Y6T7 804 aa9.74□□□□□ -0.85
LRRC28-216ENST00000559819 FADS2P1A8MWK0 482 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 J3QRK9 145 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 CLIC1O00299 241 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 RECQL5O94762 991 aaPredicted RBP9.73□□□□□ -0.85
LRRC28-216ENST00000559819 PARNO95453 639 aaKnown RBP9.73□□□□□ -0.85
LRRC28-216ENST00000559819 NUDT7P0C024 238 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 PABPC1P11940 636 aaKnown RBP9.73□□□□□ -0.85
LRRC28-216ENST00000559819 COX7A2P14406 83 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 LAG3P18627 525 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 MAPK1P28482 360 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 FMO3P31513 532 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 HNMTP50135 292 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 DAPP51397 102 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 AQP6Q13520 282 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 DUOXA1Q1HG43 343 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 PLEKHS1Q5SXH7 462 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 TMEM215Q68D42 235 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 THOC6Q86W42 341 aaKnown RBP9.73□□□□□ -0.85
LRRC28-216ENST00000559819 ZNF366Q8N895 744 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 TERB1Q8NA31 727 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 MIPOL1Q8TD10 442 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 FBXL8Q96CD0 374 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 RHNO1Q9BSD3 238 aa9.73□□□□□ -0.85
LRRC28-216ENST00000559819 RIOK2Q9BVS4 552 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms