RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 VEGFDO43915 354 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 KERAO60938 352 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 FAM20BO75063 409 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 CHRNGP07510 517 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 CKMT2P17540 419 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 PRDX6P30041 224 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 HSD17B2P37059 387 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 RPL3P39023 403 aaKnown RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 CDKN1CP49918 316 aaPredicted RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 MANFP55145 182 aaKnown RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 CSTF1Q05048 431 aaKnown RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 CSTF3Q12996 717 aaKnown RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 ARMCX4Q5H9R4 360 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 C9orf64Q5T6V5 341 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 ATG14Q6ZNE5 492 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 RBM12BQ8IXT5 1001 aaKnown RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 OFCC1Q8IZS5 231 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 ZNF276Q8N554 614 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 FGF14Q92915 247 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 BOCQ9BWV1 1114 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 CPEB1Q9BZB8 566 aaKnown RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 GPN3Q9UHW5 284 aaPredicted RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 FBXW2Q9UKT8 454 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 GPC6Q9Y625 555 aaPredicted RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 A8MT66 165 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 MUSKO15146 869 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 DLX3O60479 287 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 UROSP10746 265 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 IDO1P14902 403 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 POLR2CP19387 275 aaPredicted RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 GSSP48637 474 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 SEPHS1P49903 392 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 CCR4P51679 360 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 MAPK12P53778 367 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 MCCD1P59942 119 aaPredicted RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 SLBPQ14493 270 aaKnown RBP eCLIP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 CGB2Q6NT52 195 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 HSD11B1LQ7Z5J1 315 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 R3HCC1LQ7Z5L2 792 aaKnown RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 RELL1Q8IUW5 271 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 DCUN1D3Q8IWE4 304 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 GPR26Q8NDV2 337 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 HSPA12BQ96MM6 686 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 SLC32A1Q9H598 525 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 RERGLQ9H628 205 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 GIN1Q9NXP7 522 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 USE1Q9NZ43 259 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 WDR37Q9Y2I8 494 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 MYOCOSA0A1B0GUC4 107 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 SAP18O00422 153 aaKnown RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 SLC22A3O75751 556 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 SERPINI2O75830 405 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 TGFB1P01137 390 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 STATHP02808 62 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 CBSLP0DN79 551 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 HOXC13P31276 330 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 CBSP35520 551 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 LEPRP48357 1165 aaKnown RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 ENTPD1P49961 510 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 HK2P52789 917 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 C11orf91Q3C1V1 193 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 PDCD4Q53EL6 469 aaKnown RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 GCNT7Q6ZNI0 430 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 CYP2U1Q7Z449 544 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 SPPL2CQ8IUH8 684 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 SVOPQ8N4V2 548 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 DNAJC5GQ8N7S2 189 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 OR2T34Q8NGX1 318 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 FBXO30Q8TB52 745 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 NRG4Q8WWG1 115 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 S100ZQ8WXG8 99 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 GATA6Q92908 595 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 TRIM63Q969Q1 353 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 RANBP9Q96S59 729 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 DPYSL5Q9BPU6 564 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 RIBC2Q9H4K1 309 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 HRASLS2Q9NWW9 162 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 MOCS1Q9NZB8 636 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 LHX3Q9UBR4 397 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 C9JVG2 144 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 RFXANKO14593 260 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 KCNH1O95259 989 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 MAGP20916 626 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 DNAJB1P25685 340 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 HNMTP50135 292 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 SEMA3BQ13214 749 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 TGFBIQ15582 683 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 ZNHIT3Q15649 155 aaPredicted RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 SLC9B2Q86UD5 537 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 SLCO6A1Q86UG4 719 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 TMEFF1Q8IYR6 380 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 MTERF3Q96E29 417 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 MCMBPQ9BTE3 642 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 UGT2B28Q9BY64 529 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 PCDHAC1Q9H158 963 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 PRSS16Q9NQE7 514 aa10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 LEF1Q9UJU2 399 aaPredicted RBP10.37□□□□□ -0.75
CARMIL3-202ENST00000559694 ZNFX1Q9P2E3 1918 aaKnown RBP10.36□□□□□ -0.75
CARMIL3-202ENST00000559694 NDUFB5O43674 189 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms