RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 CARSP49589 748 aaKnown RBP12.5□□□□□ -0.41
TPM1-220ENST00000559556 ZNF75DP51815 510 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 ZRSR2Q15696 482 aaKnown RBP12.5□□□□□ -0.41
TPM1-220ENST00000559556 WASHC2DQ5SRD0 308 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 PRMT9Q6P2P2 845 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 TTC23LQ6PF05 361 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 FAM180AQ6UWF9 173 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 LDB1Q86U70 411 aaPredicted RBP12.5□□□□□ -0.41
TPM1-220ENST00000559556 MPP5Q8N3R9 675 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 PPHLN1Q8NEY8 458 aaKnown RBP12.5□□□□□ -0.41
TPM1-220ENST00000559556 OR2A1Q8NGT9 310 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 STT3BQ8TCJ2 826 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 C10orf90Q96M02 699 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 LMF1Q96S06 567 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 MIPEPQ99797 713 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 MESP1Q9BRJ9 268 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 ZNF304Q9HCX3 659 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 RAB6BQ9NRW1 208 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 ZNF282Q9UDV7 671 aaPredicted RBP12.5□□□□□ -0.41
TPM1-220ENST00000559556 OSGIN2Q9Y236 505 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 NFS1Q9Y697 457 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 MAU2Q9Y6X3 613 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 FREM3P0C091 2139 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 ARHGAP21Q5T5U3 1957 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 A0A1W2PPV9 198 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 OR2A25A4D2G3 310 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 MAP2K7O14733 419 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 KLHL18O94889 574 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 IFNB1P01574 187 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 APRTP07741 180 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 STSP08842 583 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 ERGP11308 486 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 RPS3P23396 243 aaKnown RBP eCLIP12.49□□□□□ -0.41
TPM1-220ENST00000559556 TNFRSF8P28908 595 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 CCNFP41002 786 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 BDKRB1P46663 353 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 OCA2Q04671 838 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 NAA25Q14CX7 972 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 MUM1Q2TAK8 710 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 CCSMST1Q4G0I0 132 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 ATG9BQ674R7 924 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 PTRHD1Q6GMV3 140 aaKnown RBP12.49□□□□□ -0.41
TPM1-220ENST00000559556 LINC00696Q6ZRV3 163 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 LRRC6Q86X45 466 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 TMEM139Q8IV31 216 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 RAB42Q8N4Z0 105 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 GSDMBQ8TAX9 411 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 MIEF2Q96C03 454 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 ZNF160Q9HCG1 818 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 TREX1Q9NSU2 369 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 SPATA7Q9P0W8 599 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 C3orf18Q9UK00 162 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 TTC7AQ9ULT0 858 aaPredicted RBP12.49□□□□□ -0.41
TPM1-220ENST00000559556 ENTPD4Q9Y227 616 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 RUVBL2Q9Y230 463 aaKnown RBP12.49□□□□□ -0.41
TPM1-220ENST00000559556 CAPN6Q9Y6Q1 641 aa12.49□□□□□ -0.41
TPM1-220ENST00000559556 LOC105369274A0A096LPK9 316 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 LOC102723532A0A0G2JNH3 316 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 A0A0J9YVX5 310 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 A0A0U1RQJ8 604 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 HNRNPRO43390 633 aaKnown RBP12.48□□□□□ -0.41
TPM1-220ENST00000559556 ZG16O60844 167 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 PHF2O75151 1096 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 USP1O94782 785 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 PRR35P0CG20 571 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 COX6A1P12074 109 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 FBLP22087 321 aaKnown RBP12.48□□□□□ -0.41
TPM1-220ENST00000559556 FDXRP22570 491 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 ATP5DP30049 168 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 SOX11P35716 441 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 TDGF1P3P51864 188 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 EMP3P54852 163 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 KIF5AQ12840 1032 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 GBX1Q14549 363 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 INAQ16352 499 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 PRTGQ2VWP7 1150 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 PCID2Q5JVF3 399 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 SEL1L2Q5TEA6 688 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 ZNF324BQ6AW86 544 aaPredicted RBP12.48□□□□□ -0.41
TPM1-220ENST00000559556 OTOAQ7RTW8 1153 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 KBTBD2Q8IY47 623 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 OR4N4Q8N0Y3 316 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 TXLNBQ8N3L3 684 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 BCORP1Q8N888 145 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 PSMF1Q92530 271 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 C8orf44Q96CB5 159 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 MVB12AQ96EY5 273 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 ZFYVE21Q9BQ24 234 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 EIF2B3Q9NR50 452 aaKnown RBP12.48□□□□□ -0.41
TPM1-220ENST00000559556 CHRAC1Q9NRG0 131 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 OLAHQ9NV23 265 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 PAK5Q9P286 719 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 ZC3H7BQ9UGR2 993 aaKnown RBP12.48□□□□□ -0.41
TPM1-220ENST00000559556 ZNF148Q9UQR1 794 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 ITPR3Q14573 2671 aa12.48□□□□□ -0.41
TPM1-220ENST00000559556 A0A1B0GUH1 482 aa12.47□□□□□ -0.41
TPM1-220ENST00000559556 MATN4O95460 622 aa12.47□□□□□ -0.41
TPM1-220ENST00000559556 ERVK-10P10266 1014 aa12.47□□□□□ -0.41
TPM1-220ENST00000559556 ETS1P14921 441 aa12.47□□□□□ -0.41
TPM1-220ENST00000559556 TNFSF10P50591 281 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms