RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 GPSM1Q86YR5 675 aa19.51■□□□□ 0.71
TSPAN3-207ENST00000559494 PLD6Q8N2A8 252 aaKnown RBP19.51■□□□□ 0.71
TSPAN3-207ENST00000559494 ATL1Q8WXF7 558 aa19.51■□□□□ 0.71
TSPAN3-207ENST00000559494 ALKBH8Q96BT7 664 aaKnown RBP19.51■□□□□ 0.71
TSPAN3-207ENST00000559494 RNF31Q96EP0 1072 aa19.51■□□□□ 0.71
TSPAN3-207ENST00000559494 GPR78Q96P69 363 aa19.51■□□□□ 0.71
TSPAN3-207ENST00000559494 DPH7Q9BTV6 452 aa19.51■□□□□ 0.71
TSPAN3-207ENST00000559494 SGPP1Q9BX95 441 aa19.51■□□□□ 0.71
TSPAN3-207ENST00000559494 VPS11Q9H270 941 aa19.51■□□□□ 0.71
TSPAN3-207ENST00000559494 MRPS30Q9NP92 439 aaKnown RBP19.51■□□□□ 0.71
TSPAN3-207ENST00000559494 CCDC177Q9NQR7 707 aaPredicted RBP19.51■□□□□ 0.71
TSPAN3-207ENST00000559494 INTS7Q9NVH2 962 aaKnown RBP19.51■□□□□ 0.71
TSPAN3-207ENST00000559494 RAXQ9Y2V3 346 aa19.51■□□□□ 0.71
TSPAN3-207ENST00000559494 IGKV1-8A0A0C4DH67 115 aa19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 TIAF1O95411 115 aa19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 ANXA5P08758 320 aa19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 NPPBP16860 134 aa19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 ZNF28P17035 718 aa19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 TGFBIQ15582 683 aa19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 TAF1BQ53T94 588 aaPredicted RBP19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 THEMIS2Q5TEJ8 643 aa19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 PWWP2BQ6NUJ5 590 aa19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 TIFABQ6ZNK6 161 aa19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 OR1L3Q8NH93 324 aa19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 PYCR2Q96C36 320 aa19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 MED8Q96G25 268 aa19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 ALG9Q9H6U8 611 aa19.5■□□□□ 0.71
TSPAN3-207ENST00000559494 TMEM150CB9EJG8 249 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 NRP2O60462 931 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 RFPL1O75677 317 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 KLHL2O95198 593 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 CTSBP07858 339 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 EIF2S3P41091 472 aaKnown RBP19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 PCBP4P57723 403 aaKnown RBP19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 ABATP80404 500 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 DEFB110Q30KQ9 67 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 C18orf21Q32NC0 220 aaPredicted RBP19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 PRAMEF13Q5VWM6 474 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 FBXO42Q6P3S6 717 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 CYB5D1Q6P9G0 228 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 FRA10AC1Q70Z53 315 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 STAG3L4Q8TBR4 150 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 RHBDF1Q96CC6 855 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 NAF1Q96HR8 494 aaKnown RBP19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 FCRL4Q96PJ5 515 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 OR4K3Q96R72 315 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 EGFL8Q99944 293 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 PCBD2Q9H0N5 130 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 ZNF358Q9NW07 568 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 PSMC3IPQ9P2W1 217 aaPredicted RBP19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 ZMIZ1Q9ULJ6 1067 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 SH2B3Q9UQQ2 575 aa19.49■□□□□ 0.71
TSPAN3-207ENST00000559494 MDC1Q14676 2089 aaKnown RBP19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 OR2A25A4D2G3 310 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 NCF1BA6NI72 391 aaPredicted RBP19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 NCF1CA8MVU1 366 aaPredicted RBP19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 TAPBPO15533 448 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 CTSVO60911 334 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 STK17BO94768 372 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 TUBBP07437 444 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 NCF1P14598 390 aaPredicted RBP19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 CD82P27701 267 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 TGIF1Q15583 401 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 FAM83EQ2M2I3 478 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 PTCHD3Q3KNS1 767 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 PRAMEF17Q5VTA0 474 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 ZNF425Q6IV72 752 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 CAPN13Q6MZZ7 669 aaPredicted RBP19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 LCTLQ6UWM7 567 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 TIPARPQ7Z3E1 657 aaKnown RBP19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 PAQR7Q86WK9 346 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 DTX1Q86Y01 620 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 MCATQ8IVS2 390 aaKnown RBP19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 ZNF248Q8NDW4 579 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 OR8K5Q8NH50 307 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 MZB1Q8WU39 189 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 MTBPQ96DY7 904 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 ATOH8Q96SQ7 321 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 PLCD4Q9BRC7 762 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 SPRTNQ9H040 489 aaPredicted RBP19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 CUEDC1Q9NWM3 386 aaPredicted RBP19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 EURLQ9NYK6 297 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 TBK1Q9UHD2 729 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 SERTAD3Q9UJW9 196 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 PILRAQ9UKJ1 303 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 RNF112Q9ULX5 631 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 PLCL2Q9UPR0 1127 aa19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 TMEM184BQ9Y519 407 aaPredicted RBP19.48■□□□□ 0.71
TSPAN3-207ENST00000559494 IQANK1A0A1B0GTG1 560 aa19.47■□□□□ 0.71
TSPAN3-207ENST00000559494 H3BMH7 237 aa19.47■□□□□ 0.71
TSPAN3-207ENST00000559494 KIAA0754O94854 1291 aa19.47■□□□□ 0.71
TSPAN3-207ENST00000559494 CCNDBP1O95273 360 aa19.47■□□□□ 0.71
TSPAN3-207ENST00000559494 CCND1P24385 295 aa19.47■□□□□ 0.71
TSPAN3-207ENST00000559494 SLCO1A2P46721 670 aa19.47■□□□□ 0.71
TSPAN3-207ENST00000559494 GLRBP48167 497 aa19.47■□□□□ 0.71
TSPAN3-207ENST00000559494 HNMTP50135 292 aa19.47■□□□□ 0.71
TSPAN3-207ENST00000559494 ACAP2Q15057 778 aa19.47■□□□□ 0.71
TSPAN3-207ENST00000559494 CDKL4Q5MAI5 379 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms