RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 CCNL2Q96S94 520 aaPredicted RBP17.96■□□□□ 0.47
CASC4-209ENST00000559222 PAFAH2Q99487 392 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 DPH7Q9BTV6 452 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 CHRNA10Q9GZZ6 450 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 TSPYL1Q9H0U9 437 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 SYTL2Q9HCH5 934 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 STARD5Q9NSY2 213 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 ARL15Q9NXU5 204 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.96■□□□□ 0.47
CASC4-209ENST00000559222 IL17BQ9UHF5 180 aa17.96■□□□□ 0.47
CASC4-209ENST00000559222 MRPS18BQ9Y676 258 aaKnown RBP17.96■□□□□ 0.47
CASC4-209ENST00000559222 V9GYY5 206 aaPredicted RBP17.96■□□□□ 0.47
CASC4-209ENST00000559222 ITPR1Q14643 2758 aa17.96■□□□□ 0.46
CASC4-209ENST00000559222 OR2A25A4D2G3 310 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 POC1B-GALNT4F8VUJ3 575 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 RIPK2O43353 540 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 ATXN8OSP0DMR3 200 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 CD1DP15813 335 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 GCAP28676 217 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 CMPK1P30085 196 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 STAT5AP42229 794 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 PMS2P54278 862 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 ITGA1P56199 1179 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 CSHL1Q14406 222 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 PRAMEF13Q5VWM6 474 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 PAQR7Q86WK9 346 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 PLD3Q8IV08 490 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 MCATQ8IVS2 390 aaKnown RBP17.95■□□□□ 0.46
CASC4-209ENST00000559222 DTWD1Q8N5C7 304 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 IL22RA1Q8N6P7 574 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 DCAKDQ8WVC6 231 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 DERL2Q9GZP9 239 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 PRORYQ9H606 182 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 FANCEQ9HB96 536 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 MRPS30Q9NP92 439 aaKnown RBP17.95■□□□□ 0.46
CASC4-209ENST00000559222 CCDC177Q9NQR7 707 aaPredicted RBP17.95■□□□□ 0.46
CASC4-209ENST00000559222 EURLQ9NYK6 297 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 CTNNAL1Q9UBT7 734 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 PLCL2Q9UPR0 1127 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 KLK4Q9Y5K2 254 aa17.95■□□□□ 0.46
CASC4-209ENST00000559222 LOC105369274A0A096LPK9 316 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 LOC102723532A0A0G2JNH3 316 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 A0A0J9YVX5 310 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 TERTO14746 1132 aaKnown RBP17.94■□□□□ 0.46
CASC4-209ENST00000559222 ZNF749O43361 778 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 MED26O95402 600 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 ALDOAP04075 364 aaKnown RBP17.94■□□□□ 0.46
CASC4-209ENST00000559222 HSD17B2P37059 387 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 ATP1A2P50993 1020 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 PTCHD3Q3KNS1 767 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 FBXO48Q5FWF7 155 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 THEMIS2Q5TEJ8 643 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 ARHGAP40Q5TG30 622 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 ZNF425Q6IV72 752 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 RNF44Q7L0R7 432 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 CENPLQ8N0S6 344 aaPredicted RBP17.94■□□□□ 0.46
CASC4-209ENST00000559222 OR4N4Q8N0Y3 316 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 ZNF655Q8N720 491 aaPredicted RBP17.94■□□□□ 0.46
CASC4-209ENST00000559222 CT55Q8WUE5 264 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 FBXL8Q96CD0 374 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 UBXN10Q96LJ8 280 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 OR4K3Q96R72 315 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 PLCD4Q9BRC7 762 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 SGPP1Q9BX95 441 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 SNX15Q9NRS6 342 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 IGSF5Q9NSI5 407 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 PCMTD2Q9NV79 361 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 CROTQ9UKG9 612 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 NOVA2Q9UNW9 492 aaKnown RBP17.94■□□□□ 0.46
CASC4-209ENST00000559222 OARD1Q9Y530 152 aa17.94■□□□□ 0.46
CASC4-209ENST00000559222 A0A087WUV0 522 aaPredicted RBP17.93■□□□□ 0.46
CASC4-209ENST00000559222 NCF1BA6NI72 391 aaPredicted RBP17.93■□□□□ 0.46
CASC4-209ENST00000559222 ZNF839A8K0R7 811 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 NCF1CA8MVU1 366 aaPredicted RBP17.93■□□□□ 0.46
CASC4-209ENST00000559222 E7EQ34 232 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 HAT1O14929 419 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 CPNE3O75131 537 aaKnown RBP17.93■□□□□ 0.46
CASC4-209ENST00000559222 OR2B3O76000 313 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 STATHP02808 62 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 ENO2P09104 434 aaPredicted RBP17.93■□□□□ 0.46
CASC4-209ENST00000559222 NCF1P14598 390 aaPredicted RBP17.93■□□□□ 0.46
CASC4-209ENST00000559222 TNFRSF8P28908 595 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 RORAP35398 523 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 DEKP35659 375 aaKnown RBP17.93■□□□□ 0.46
CASC4-209ENST00000559222 GCGRP47871 477 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 KCNC1P48547 511 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 TMPRSS3P57727 454 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 SNRPNP63162 240 aaKnown RBP17.93■□□□□ 0.46
CASC4-209ENST00000559222 CYP4F2P78329 520 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 PRDX1Q06830 199 aaKnown RBP17.93■□□□□ 0.46
CASC4-209ENST00000559222 MAP7Q14244 749 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 C1orf189Q5VU69 101 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 FAM69BQ5VUD6 431 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 BROXQ5VW32 411 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 FBXO42Q6P3S6 717 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 CYB5D1Q6P9G0 228 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 RAPH1Q70E73 1250 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 TMEM151BQ8IW70 566 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 ESX1Q8N693 406 aa17.93■□□□□ 0.46
CASC4-209ENST00000559222 OR8K5Q8NH50 307 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms