RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 C2CD4AQ8NCU7 369 aaPredicted RBP11.54□□□□□ -0.56
TPM1-216ENST00000558910 SPATA4Q8NEY3 305 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 OR8K5Q8NH50 307 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 CD200R1Q8TD46 325 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 EEF1AKMT1Q8WVE0 214 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 INPP5DQ92835 1189 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 SLCO2A1Q92959 643 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 MED8Q96G25 268 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 MENTQ9BUN1 341 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 TRIM4Q9C037 500 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 SAYSD1Q9NPB0 183 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 TXLNGQ9NUQ3 528 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 EURLQ9NYK6 297 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 GPN3Q9UHW5 284 aaPredicted RBP11.54□□□□□ -0.56
TPM1-216ENST00000558910 SNX7Q9UNH6 387 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 MAN2B2Q9Y2E5 1009 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 MED16Q9Y2X0 877 aa11.54□□□□□ -0.56
TPM1-216ENST00000558910 HEMK1Q9Y5R4 338 aaPredicted RBP11.54□□□□□ -0.56
TPM1-216ENST00000558910 ARGFXA6NJG6 315 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 ZSCAN9O15535 394 aaPredicted RBP11.53□□□□□ -0.56
TPM1-216ENST00000558910 URI1O94763 535 aaPredicted RBP11.53□□□□□ -0.56
TPM1-216ENST00000558910 TTC4O95801 387 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 AHSGP02765 367 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 ITGB2P05107 769 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 PTPN4P29074 926 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 OTX2P32243 289 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 ETF1P62495 437 aaKnown RBP11.53□□□□□ -0.56
TPM1-216ENST00000558910 SLC7A5Q01650 507 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 CALCOCO2Q13137 446 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 KCNAB2Q13303 367 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 RAPSNQ13702 412 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 TRADDQ15628 312 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 TEDDM1Q5T9Z0 273 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 CPZQ66K79 652 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 PAQR3Q6TCH7 311 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 SHISA6Q6ZSJ9 500 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 PLD3Q8IV08 490 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 TMEM151BQ8IW70 566 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 CARFQ8N187 725 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 RNF217Q8TC41 542 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 MAGEC3Q8TD91 643 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.53□□□□□ -0.56
TPM1-216ENST00000558910 SLC22A18Q96BI1 424 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 LINGO1Q96FE5 620 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 SELENOSQ9BQE4 189 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 NDC1Q9BTX1 674 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 RAB11FIP5Q9BXF6 653 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 UNKQ9C0B0 810 aaKnown RBP11.53□□□□□ -0.56
TPM1-216ENST00000558910 PLAC1Q9HBJ0 212 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 INTS7Q9NVH2 962 aaKnown RBP11.53□□□□□ -0.56
TPM1-216ENST00000558910 TAC3Q9UHF0 121 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 ADAMTS6Q9UKP5 1117 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 PLCL2Q9UPR0 1127 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 DHRS7Q9Y394 339 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 MAU2Q9Y6X3 613 aa11.53□□□□□ -0.56
TPM1-216ENST00000558910 SNRNP200O75643 2136 aaKnown RBP11.53□□□□□ -0.56
TPM1-216ENST00000558910 ZNF462Q96JM2 2506 aa11.52□□□□□ -0.56
TPM1-216ENST00000558910 A0A1W2PPV9 198 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 A6NL46 340 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 C9J4A7 227 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 MASP2O00187 686 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 ZBTB14O43829 449 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 SLC28A2O43868 658 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 MATN4O95460 622 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 AGXTP21549 392 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 CMPK1P30085 196 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 CCL11P51671 97 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 PNLIPRP1P54315 467 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 PLTPP55058 493 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 ADARP55265 1226 aaKnown RBP11.52□□□□□ -0.57
TPM1-216ENST00000558910 GBX1Q14549 363 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 ZNF460Q14592 562 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 HECTD2Q5U5R9 776 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 FRMPD2BQ6IN97 320 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 STRA8Q7Z7C7 330 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 PALM2Q8IXS6 379 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 PRSS58Q8IYP2 241 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 OR2L3Q8NG85 312 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 GABPB2Q8TAK5 448 aaPredicted RBP11.52□□□□□ -0.57
TPM1-216ENST00000558910 APOBEC4Q8WW27 367 aaKnown RBP11.52□□□□□ -0.57
TPM1-216ENST00000558910 KCNJ9Q92806 393 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 MRRFQ96E11 262 aaKnown RBP11.52□□□□□ -0.57
TPM1-216ENST00000558910 DPH7Q9BTV6 452 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 YIPF2Q9BWQ6 316 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 ATG10Q9H0Y0 220 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 MRPS30Q9NP92 439 aaKnown RBP11.52□□□□□ -0.57
TPM1-216ENST00000558910 FAM114A2Q9NRY5 505 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 ZFATQ9P243 1243 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 IFT80Q9P2H3 777 aaPredicted RBP11.52□□□□□ -0.57
TPM1-216ENST00000558910 RNF14Q9UBS8 474 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 POLHQ9Y253 713 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 PSAT1Q9Y617 370 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 COMMD10Q9Y6G5 202 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 TEX264Q9Y6I9 313 aa11.52□□□□□ -0.57
TPM1-216ENST00000558910 LOC105369274A0A096LPK9 316 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 LOC102723532A0A0G2JNH3 316 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 ESYT3A0FGR9 886 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 C21orf140B9A014 251 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 FFAR3O14843 346 aa11.51□□□□□ -0.57
TPM1-216ENST00000558910 GPR42O15529 346 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms