RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 SMPDL3AQ92484 453 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 PKP4Q99569 1192 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 SPSB2Q99619 263 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 GPR21Q99679 349 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 AARSD1Q9BTE6 412 aaKnown RBP16.28■□□□□ 0.2
LRRC28-210ENST00000558879 CCDC68Q9H2F9 335 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 WDR54Q9H977 334 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 ASIC3Q9UHC3 531 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 ZNF451Q9Y4E5 1061 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 GFYI3L273 518 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 MED26O95402 600 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 SLC16A8O95907 504 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 HSD17B2P37059 387 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 SKIV2L2P42285 1042 aaKnown RBP16.27■□□□□ 0.2
LRRC28-210ENST00000558879 PNLIPRP1P54315 467 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 VSX2P58304 361 aaPredicted RBP16.27■□□□□ 0.2
LRRC28-210ENST00000558879 DHX9Q08211 1270 aaKnown RBP16.27■□□□□ 0.2
LRRC28-210ENST00000558879 IGFBP7Q16270 282 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 NKG7Q16617 165 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 MSS51Q4VC12 460 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 HSP90AA5PQ58FG0 334 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 DCAF10Q5QP82 559 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 ZNF425Q6IV72 752 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 SUSD1Q6UWL2 747 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 CYHR1Q6ZMK1 362 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 OVCH1Q7RTY7 1134 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 PCGF5Q86SE9 256 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 PAQR7Q86WK9 346 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 HPS6Q86YV9 775 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 CNTN4Q8IWV2 1026 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 C2CD4AQ8NCU7 369 aaPredicted RBP16.27■□□□□ 0.2
LRRC28-210ENST00000558879 ZNF480Q8WV37 535 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 ASB11Q8WXH4 323 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 PTERQ96BW5 349 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 ZFYVE21Q9BQ24 234 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 PLCD4Q9BRC7 762 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 DPH7Q9BTV6 452 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 SYNPO2LQ9H987 977 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 PLAC1Q9HBJ0 212 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 GPR83Q9NYM4 423 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 SCN2AQ99250 2005 aa16.27■□□□□ 0.2
LRRC28-210ENST00000558879 ESPL1Q14674 2120 aa16.27■□□□□ 0.19
LRRC28-210ENST00000558879 LOC105369274A0A096LPK9 316 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 LOC102723532A0A0G2JNH3 316 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 A0A0J9YVX5 310 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 CLEC18AA5D8T8 446 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 E7ENX8 843 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 BANF1O75531 89 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 HAUS5O94927 633 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 TTC4O95801 387 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 PIM1P11309 404 aaPredicted RBP16.26■□□□□ 0.19
LRRC28-210ENST00000558879 ALAS2P22557 587 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 TIAL1Q01085 375 aaKnown RBP eCLIP16.26■□□□□ 0.19
LRRC28-210ENST00000558879 TAP2Q03519 686 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 PRTGQ2VWP7 1150 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 NADK2Q4G0N4 442 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 ICE2Q659A1 982 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 CLEC18BQ6UXF7 455 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 CREG2Q8IUH2 290 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 CPNE9Q8IYJ1 553 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 OR4N4Q8N0Y3 316 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 DTWD1Q8N5C7 304 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 CLEC18CQ8NCF0 446 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.26■□□□□ 0.19
LRRC28-210ENST00000558879 INPP5DQ92835 1189 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 NACC2Q96BF6 587 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 C10orf90Q96M02 699 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 FER1L6-AS2Q96M78 137 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 EBNA1BP2Q99848 306 aaKnown RBP16.26■□□□□ 0.19
LRRC28-210ENST00000558879 WDR83Q9BRX9 315 aaKnown RBP16.26■□□□□ 0.19
LRRC28-210ENST00000558879 ACAT2Q9BWD1 397 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 MRPS30Q9NP92 439 aaKnown RBP16.26■□□□□ 0.19
LRRC28-210ENST00000558879 IARS2Q9NSE4 1012 aaKnown RBP16.26■□□□□ 0.19
LRRC28-210ENST00000558879 P4HTMQ9NXG6 502 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 CTSFQ9UBX1 484 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 TAC3Q9UHF0 121 aa16.26■□□□□ 0.19
LRRC28-210ENST00000558879 ZNF839A8K0R7 811 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 VPS26AO75436 327 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 IGHEP01854 428 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 MMP11P24347 488 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 GABRB3P28472 473 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 IMPA1P29218 277 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 RPA3P35244 121 aaPredicted RBP16.25■□□□□ 0.19
LRRC28-210ENST00000558879 EMP3P54852 163 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 MLLT10P55197 1068 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 SOX8P57073 446 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 FAM214AQ32MH5 1076 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 SPANXN3Q5MJ09 141 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 WASHC2DQ5SRD0 308 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 VWA5B1Q5TIE3 1220 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 PIWIL4Q7Z3Z4 852 aaKnown RBP16.25■□□□□ 0.19
LRRC28-210ENST00000558879 GALNT7Q86SF2 657 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 Q8NA96 180 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 PPFIBP2Q8ND30 876 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 NAT9Q9BTE0 207 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 C5AR2Q9P296 337 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 NXT1Q9UKK6 140 aaKnown RBP16.25■□□□□ 0.19
LRRC28-210ENST00000558879 G3BP2Q9UN86 482 aaKnown RBP16.25■□□□□ 0.19
LRRC28-210ENST00000558879 PLAAQ9Y263 795 aa16.25■□□□□ 0.19
LRRC28-210ENST00000558879 HIVEP3Q5T1R4 2406 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms